RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 STK19P49842 368 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 CYP4F8P98187 520 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 RELAQ04206 551 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 CHRNB3Q05901 458 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 FAM98BQ52LJ0 330 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 XKR5Q6UX68 686 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GCNT7Q6ZNI0 430 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 DCAF4L2Q8NA75 395 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 GPR26Q8NDV2 337 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 SKA2Q8WVK7 121 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 TANKQ92844 425 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 COX4I2Q96KJ9 171 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ZBTB18Q99592 522 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF639Q9UID6 485 aa12.63□□□□□ -0.39
HIF3A-204ENST00000300862 MBD1Q9UIS9 605 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 EIF3LQ9Y262 564 aaKnown RBP12.63□□□□□ -0.39
HIF3A-204ENST00000300862 DEAF1O75398 565 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 SERPINB7O75635 380 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 PGRP06401 933 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 RAP2AP10114 183 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 GJA1P17302 382 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 CTSOP43234 321 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 AP1S1P61966 158 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 CDKN3Q16667 212 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 DGKKQ5KSL6 1271 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 USP51Q70EK9 711 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 DET1Q7L5Y6 550 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 NAT16Q8N8M0 369 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 BORCS5Q969J3 196 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 DOK1Q99704 481 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 LRTM1Q9HBL6 345 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 K7EPI3 171 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 AREL1O15033 823 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 GMNNO75496 209 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 PRKACGP22612 351 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 AKT1P31749 480 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 CD70P32970 193 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 GNPDA1P46926 289 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 GSTM4Q03013 218 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 CRY1Q16526 586 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF829Q3KNS6 432 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 DCDC5Q6ZRR9 648 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF548Q8NEK5 533 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 OR52E6Q96RD3 313 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 C2orf49Q9BVC5 232 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-204ENST00000300862 STOML2Q9UJZ1 356 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF232Q9UNY5 417 aa12.62□□□□□ -0.39
HIF3A-204ENST00000300862 FUOMA2VDF0 154 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 MANBAO00462 879 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF821O75541 412 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 PRKD3O94806 890 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 EFEMP2O95967 443 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 C1QCP02747 245 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 FUCA1P04066 466 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ALPLP05186 524 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 C7P10643 843 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 EPB42P16452 691 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 IL7RP16871 459 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 RPS3P23396 243 aaKnown RBP eCLIP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 DCKP27707 260 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 PHC1P78364 1004 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 LMAN2Q12907 356 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 DAG1Q14118 895 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ZXDCQ2QGD7 858 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 RETSATQ6NUM9 610 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ZNF783Q6ZMS7 281 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 BBS7Q8IWZ6 715 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 NCLNQ969V3 563 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 PLEKHA8Q96JA3 519 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 SMG9Q9H0W8 520 aaKnown RBP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 TOR3AQ9H497 397 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 HPS4Q9NQG7 708 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 DLGAP4Q9Y2H0 992 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 U3KQV3 271 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 DYTNA2CJ06 578 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 UPK3BL1B0FP48 263 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 UPK3BL2E5RIL1 263 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 LRATO95237 230 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ZBTB11O95625 1053 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-204ENST00000300862 CST1P01037 141 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 THRBP10828 461 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 BCKDHAP12694 445 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 CA8P35219 290 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 ALDH3A2P51648 485 aa12.61□□□□□ -0.39
HIF3A-204ENST00000300862 HSPA14Q0VDF9 509 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms