RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PSME2Q9UL46 239 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 KCNH4Q9UQ05 1017 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 CEPT1Q9Y6K0 416 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 IL12AP29459 219 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 EPS8Q12929 822 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 CASP12Q6UXS9 341 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 USP45Q70EL2 814 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 OR4K1Q8NGD4 311 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 NELL1Q92832 810 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 INTS10Q9NVR2 710 aaKnown RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 ERVK-18Q9QC07 812 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SLC25A13Q9UJS0 675 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SNX4O95219 450 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 NCS1P62166 190 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SELPLGQ14242 412 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 CPTPQ5TA50 214 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 ITIH5Q86UX2 942 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 RAB2BQ8WUD1 216 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SGCDQ92629 289 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SCAMP4Q969E2 229 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 AASDHPPTQ9NRN7 309 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CREG1O75629 220 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ESR1P03372 595 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CATP04040 527 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 SMIM18P0DKX4 95 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CKBP12277 381 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CDH1P12830 882 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ARCN1P48444 511 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 BMXP51813 675 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 DNAJB13P59910 316 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 MEF2AQ02078 507 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 SEMA3AQ14563 771 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TAF1AQ15573 450 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 PTCHD3Q3KNS1 767 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 PDZK1Q5T2W1 519 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 FUNDC1Q8IVP5 155 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TMEM102Q8N9M5 508 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 MAGEH1Q9H213 219 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ZDHHC7Q9NXF8 308 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CAB39Q9Y376 341 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 SLC38A8A6NNN8 435 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 LOC110117498-PIK3R3F6TDL0 507 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CLIC1O00299 241 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 MUSKO15146 869 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TNFRSF21O75509 655 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 PCDH8O95206 1070 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 VIPP01282 170 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ENGP17813 658 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ARNTP27540 789 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 PTGER3P43115 390 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CACNG1Q06432 222 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 PM20D1Q6GTS8 502 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 PTCHD4Q6ZW05 846 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CLEC14AQ86T13 490 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 XAGE5Q8WWM1 108 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 SOCS4Q8WXH5 440 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 FUBP1Q96AE4 644 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 SUSD3Q96L08 255 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 SLC30A3Q99726 388 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 OLAHQ9NV23 265 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 CFAP20Q9Y6A4 193 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 PIPSLA2A3N6 862 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TMCC2O75069 709 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TGFB1P01137 390 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 UMPSP11172 480 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 GPX3P22352 226 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 GTF2E2P29084 291 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 PTPN5P54829 565 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 RAB25P57735 213 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 SETMARQ53H47 684 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 OTUD1Q5VV17 481 aaPredicted RBP13.03□□□□□ -0.32
CASC4-201ENST00000299957 DENND5AQ6IQ26 1287 aa13.03□□□□□ -0.32
CASC4-201ENST00000299957 TMEM207Q6UWW9 146 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms