RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MAPK12P53778 367 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SLC18A1P54219 525 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 RTP1P59025 263 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 VAMP2P63027 116 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SYT16Q17RD7 645 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 DCLRE1AQ6PJP8 1040 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SSX6Q7RTT6 188 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PHF13Q86YI8 300 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PHC3Q8NDX5 983 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SLC38A4Q969I6 547 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CENPNQ96H22 339 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBX5Q99593 518 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 COPS7AQ9UBW8 275 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TRAPPC13A5PLN9 417 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CCRL2O00421 344 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 GRM6O15303 877 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TSPAN1O60635 241 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 FKTNO75072 461 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 IFNA10P01566 189 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 IFNA4P05014 189 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CYP3A4P08684 503 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF20P17024 532 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CORO1AP31146 461 aaKnown RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ETV1P50549 477 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF460Q14592 562 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 AAK1Q2M2I8 961 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 GARNL3Q5VVW2 1013 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 UBQLNLQ8IYU4 475 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 P2RX7Q99572 595 aaKnown RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 COLEC10Q9Y6Z7 277 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 MYPNQ86TC9 1320 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CEMIPQ8WUJ3 1361 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3DA0A087WVF3 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3IA0A087WXS9 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3EA0A087X179 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3KA0A087X1G2 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 RCCD1A6NED2 376 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3FA6NER0 549 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3LB9A6J9 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TLR5O60602 858 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 HCN1O60741 890 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 GADD45GO95257 159 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PRAMEF1O95521 474 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3HP0C7X1 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 GNPDA1P46926 289 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CLCN7P51798 805 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 AIF1P55008 147 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CD83Q01151 205 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 KLF10Q13118 480 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 UBXN11Q5T124 520 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3GQ6DHY5 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3CQ6IPX1 549 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 RAB12Q6IQ22 244 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TBC1D3Q8IZP1 549 aaPredicted RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SLC44A1Q8WWI5 657 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 RIT1Q92963 219 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PPA2Q9H2U2 334 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 COMMD3Q9UBI1 195 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 STUB1Q9UNE7 303 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PDE10AQ9Y233 779 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 FABP12A6NFH5 140 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 OR6C70A6NIJ9 312 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SAP18O00422 153 aaKnown RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 CBLBQ13191 982 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 SCGB2B2Q4G0G5 96 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PPP1R15BQ5SWA1 713 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PRAMEF19Q5SWL8 479 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 C6orf183Q5T699 404 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ADGRG6Q86SQ4 1221 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PIGZQ86VD9 579 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 FITM2Q8N6M3 262 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 OR14K1Q8NGZ2 314 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ZCCHC10Q8TBK6 192 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 ASB15Q8WXK1 588 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 NXPE2Q96DL1 559 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 C7orf26Q96N11 449 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 C12orf65Q9H3J6 166 aaKnown RBP5.47□□□□□ -1.53
CPSF2-201ENST00000298875 TRPV4Q9HBA0 871 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 IL1RAPQ9NPH3 570 aa5.47□□□□□ -1.53
CPSF2-201ENST00000298875 PTPRJQ12913 1337 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 PGLSO95336 258 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 ARL3P36405 182 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 SDR16C5Q8N3Y7 309 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 COX18Q8N8Q8 333 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 CEP76Q8TAP6 659 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 LPGAT1Q92604 370 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 CCDC120Q96HB5 630 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 WRAP53Q9BUR4 548 aaKnown RBP5.46□□□□□ -1.53
CPSF2-201ENST00000298875 CDT1Q9H211 546 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 PRDM12Q9H4Q4 367 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 EDARQ9UNE0 448 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 ATP6V1G2-DDX39BF2Z307 99 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 ALOX15BO15296 676 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 RLN2P04090 185 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 C8BP07358 591 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 SRPRAP08240 638 aaKnown RBP5.46□□□□□ -1.53
CPSF2-201ENST00000298875 PROZP22891 400 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 KLHL26Q53HC5 615 aa5.46□□□□□ -1.53
CPSF2-201ENST00000298875 RALGPS1Q5JS13 557 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms