RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PAQR5Q9NXK6 330 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 SNX6Q9UNH7 406 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 HS3ST4Q9Y661 456 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 LCHNA4D1U4 455 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PABPN1LA6NDY0 278 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 AGAP5A6NIR3 686 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 RGS14O43566 566 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 LDB2O43679 373 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 OR1I1O60431 355 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ULK1O75385 1050 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 WDR47O94967 919 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 NPPAP01160 153 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 COL6A1P12109 1028 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 EFNA1P20827 205 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 MASP1P48740 699 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 SCNN1GP51170 649 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF181Q2M3W8 571 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 FAM214AQ32MH5 1076 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 NEK5Q6P3R8 708 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 SLC22A15Q8IZD6 547 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TMEM132CQ8N3T6 1108 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ATP6V0D2Q8N8Y2 350 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TRIM62Q9BVG3 475 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ASB1Q9Y576 335 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PAPSS2O95340 614 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 VIPP01282 170 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PKMP14618 531 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PCMT1P22061 227 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 EPHA2P29317 976 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 FCGRTP55899 365 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF621Q6ZSS3 439 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 NEK10Q6ZWH5 1172 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 MOB2Q70IA6 237 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SLC38A4Q969I6 547 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PYURFQ96I23 114 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 KCNC2Q96PR1 638 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 BARD1Q99728 777 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 COQ7Q99807 217 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 C16orf70Q9BSU1 422 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 DERL2Q9GZP9 239 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 RNF167Q9H6Y7 350 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 C1orf109Q9NX04 203 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 DNMT3BQ9UBC3 853 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF451Q9Y4E5 1061 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PTCH2Q9Y6C5 1203 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 RRN3P2A6NIE6 340 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 NTRK1P04629 796 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 POU1F1P28069 291 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SLC15A1P46059 708 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 TBX4P57082 545 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ALFQ53S48 1182 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SNAP47Q5SQN1 464 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 OR2T5Q6IEZ7 315 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PARP16Q8N5Y8 322 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 OR8J3Q8NGG0 315 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 OR2T29Q8NH02 315 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SPPL2AQ8TCT8 520 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SMIM14Q96QK8 99 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF300Q96RE9 604 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 BRINP2Q9C0B6 783 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZYG11BQ9C0D3 744 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SLIRPQ9GZT3 109 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 IRF2BPLQ9H1B7 796 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 KLHL20Q9Y2M5 609 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 A0A0U1RQS6 177 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 A0A1W2PQH9 124 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 EFCAB10A6NFE3 127 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 M0QZ92 97 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 FGF1P05230 155 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 OR4Q2P0C623 313 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 CLK3P49761 638 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 AFF1P51825 1210 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 GTF2H2Q13888 395 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ARHGEF7Q14155 803 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ARMCX4Q5H9R4 360 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 GTF2H2CQ6P1K8 395 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 DOK6Q6PKX4 331 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 TCAIMQ8N3R3 496 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 BRSK1Q8TDC3 778 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 PGAP3Q96FM1 320 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 THG1LQ9NWX6 298 aaKnown RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 RBPJLQ9UBG7 517 aa11.18□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF490Q9ULM2 529 aaPredicted RBP11.18□□□□□ -0.62
TRUB1-201ENST00000298746 OTCP00480 354 aa11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RPLP0P05388 317 aaKnown RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 RPS17P08708 135 aaKnown RBP11.17□□□□□ -0.62
TRUB1-201ENST00000298746 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms