RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SIK2Q9H0K1 926 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 EHD3Q9NZN3 535 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 RAPGEFL1Q9UHV5 662 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 LCHNA4D1U4 455 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 ENPP3O14638 875 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CD3EAPO15446 510 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CAPN5O15484 640 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SEC22BO75396 215 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CREG1O75629 220 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 OR4F21O95013 312 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 GLP2RO95838 553 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 PEX11BO96011 259 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CD86P42081 329 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 MAGEA11P43364 429 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 ZNF280AP59817 542 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 GPR50Q13585 617 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 IHHQ14623 411 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SETMARQ53H47 684 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SNAP47Q5SQN1 464 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 NXNL2Q5VZ03 156 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 TSPYL5Q86VY4 417 aaPredicted RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 RNF34Q969K3 372 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 TBCDQ9BTW9 1192 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 REXO4Q9GZR2 422 aaKnown RBP13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SLA2Q9H6Q3 261 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SYTL2Q9HCH5 934 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC25A37Q9NYZ2 338 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 SNX6Q9UNH7 406 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
RPUSD4-201ENST00000298317 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 WBP4O75554 376 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SEMA3DO95025 777 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SERPINA1P01009 418 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 KRT6AP02538 564 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 KRT6BP04259 564 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 PGK2P07205 417 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 MMP2P08253 660 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CCR1P32246 355 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 C19orf57Q0VDD7 668 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CARD16Q5EG05 197 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 MRNIPQ6NTE8 343 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC51BQ86UW2 128 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CCDC71Q8IV32 467 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CDYL2Q8N8U2 506 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 ZNF382Q96SR6 550 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 MED16Q9Y2X0 877 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 POLR3HQ9Y535 204 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 FAM220BPB1ANY3 271 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CDC7O00311 574 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 E2F3O00716 465 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 IGLV3-25P01717 112 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 HOXA9P31269 272 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 HTR7P34969 479 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 LIMK1P53667 647 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 EIF4EBP2Q13542 120 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 TBCEQ15813 527 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SIRPB2Q5JXA9 342 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 WSCD1Q658N2 575 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CEP68Q76N32 757 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC46A3Q7Z3Q1 461 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 SNX20Q7Z614 316 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 APH1BQ8WW43 257 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 POP5Q969H6 163 aaKnown RBP13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 NCLNQ969V3 563 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 PYURFQ96I23 114 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 ASB1Q9Y576 335 aa13.23□□□□□ -0.29
RPUSD4-201ENST00000298317 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 AP3D1O14617 1153 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 ATXN1LP0C7T5 689 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 OGNP20774 298 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 GRK5P34947 590 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 HTR6P50406 440 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 ERVPABLB-1P60509 514 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 STARD3Q14849 445 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 LRRC26Q2I0M4 334 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 RUNDC3AQ59EK9 446 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms