RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ATP6V1C1P21283 382 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 PBLDP30039 288 aaPredicted RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 TRIM23P36406 574 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 SLC6A12P48065 614 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 PIK3CGP48736 1102 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 IRF4Q15306 451 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 SKIV2LQ15477 1246 aaKnown RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 MAP7D1Q3KQU3 841 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 EOGTQ5NDL2 527 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 LRRC70Q7Z2Q7 622 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 C11orf96Q7Z7L8 435 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 OR4F6Q8NGB9 312 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 RPLP0P6Q8NHW5 317 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 FAM3CQ92520 227 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 SIPA1Q96FS4 1042 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 CADM1Q9BY67 442 aaKnown RBP15.18■□□□□ 0.02
LSM6-201ENST00000296581 C1orf21Q9H246 121 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 SLC32A1Q9H598 525 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 PREBQ9HCU5 417 aa15.18■□□□□ 0.02
LSM6-201ENST00000296581 A0A1W2PQU0 124 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PABPN1LA6NDY0 278 aaKnown RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 ARHGEF33A8MVX0 844 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 UBDO15205 165 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 RNGTTO60942 597 aaKnown RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 VPS4BO75351 444 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CHEK2O96017 543 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 COX4I1P13073 169 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PDHA2P29803 388 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CCR3P51677 355 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PLOD1Q02809 727 aaPredicted RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 ABRQ12979 859 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 HERC3Q15034 1050 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 XKR7Q5GH72 579 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 KBTBD6Q86V97 674 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 POU5F2Q8N7G0 328 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 RBM15BQ8NDT2 890 aaKnown RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 OR2L2Q8NH16 312 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 HM13Q8TCT9 377 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 FBXL8Q96CD0 374 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CDK15Q96Q40 435 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CCT7Q99832 543 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 NTMT1Q9BV86 223 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 LGR4Q9BXB1 951 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 AKTIPQ9H8T0 292 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 GALNT8Q9NY28 637 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 TMEM98Q9Y2Y6 226 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 ANGPTL3Q9Y5C1 460 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PTGDR2Q9Y5Y4 395 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 ATP6AP2A0A1C7CYW4 349 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 MGAT4DA6NG13 374 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 H3BM21 787 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 GSC2O15499 205 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 ATP6AP2O75787 350 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 POP7O75817 140 aaKnown RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 WFS1O76024 890 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PAK4O96013 591 aaPredicted RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 EPB42P16452 691 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 GNAZP19086 355 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 ATP4BP51164 291 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 KLC1Q07866 573 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 NUMA1Q14980 2115 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 SLC44A4Q53GD3 710 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.17■□□□□ 0.02
LSM6-201ENST00000296581 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 LONP2Q86WA8 852 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 HORMAD1Q86X24 394 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 DDIASQ8IXT1 998 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CFAP206Q8IYR0 622 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 CDYL2Q8N8U2 506 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 FBXO27Q8NI29 283 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 MARK4Q96L34 752 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 MRGPRX1Q96LB2 322 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 PFDN4Q9NQP4 134 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 MMP17Q9ULZ9 603 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 BTRCQ9Y297 605 aa15.17■□□□□ 0.02
LSM6-201ENST00000296581 UNC80Q8N2C7 3258 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 CATP04040 527 aaKnown RBP15.16■□□□□ 0.02
LSM6-201ENST00000296581 LINC00032P0C843 101 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 PRR35P0CG20 571 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 SGCGQ13326 291 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 TDGQ13569 410 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 SQLEQ14534 574 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 INPP5AQ14642 412 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 CRTC3Q6UUV7 619 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 TMEM92Q6UXU6 159 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 MILR1Q7Z6M3 343 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 FBXO15Q8NCQ5 510 aaPredicted RBP15.16■□□□□ 0.02
LSM6-201ENST00000296581 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 HLA-CQ95604 372 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 ATP6V1E2Q96A05 226 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 OSBPL6Q9BZF3 934 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 POLG2Q9UHN1 485 aa15.16■□□□□ 0.02
LSM6-201ENST00000296581 PCYT1BQ9Y5K3 369 aaPredicted RBP15.16■□□□□ 0.02
LSM6-201ENST00000296581 GPR89AB7ZAQ6 455 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 KATNA1O75449 491 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 CAPN1P07384 714 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 EBLN1P0CF75 366 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 GPR89BP0CG08 455 aa15.15■□□□□ 0.02
LSM6-201ENST00000296581 THRAP10827 490 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms