RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MGAT4DA6NG13 374 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 UBXN8O00124 270 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 INPP4BO15327 924 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 TSPAN12O95859 305 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 IFNA16P05015 189 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 C8GP07360 202 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GRAMD1BQ3KR37 738 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 DEFB119Q8N690 84 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CCDC126Q96EE4 140 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 LOXL4Q96JB6 756 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 FAR2Q96K12 515 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 PRRX2Q99811 253 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 ERVMER34-1Q9H9K5 563 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 ACSL5Q9ULC5 683 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 COL6A6A6NMZ7 2263 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 UNC13CQ8NB66 2214 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GALR2O43603 387 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 NIPSNAP2O75323 286 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SUPT7LO94864 414 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 AVPR2P30518 371 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 IFT88Q13099 833 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PYCR3Q53H96 274 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 FAAH2Q6GMR7 532 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 LVRNQ6Q4G3 990 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM220Q6QAJ8 160 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 UNC5DQ6UXZ4 953 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 WASH2PQ6VEQ5 465 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ACAD11Q709F0 780 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 DET1Q7L5Y6 550 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CMC1Q7Z7K0 106 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 GALNT13Q8IUC8 556 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 MYO1HQ8N1T3 1032 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ZBTB44Q8NCP5 570 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 LKAAEAR1Q8TD35 194 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CCDC134Q9H6E4 229 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 WASH6PQ9NQA3 447 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KLQ9UEF7 1012 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 APOBEC2Q9Y235 224 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 RNF103-CHMP3A0A140T963 221 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM120BA0PK00 339 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SYCE1LA8MT33 242 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KLK8O60259 260 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CDK14O94921 469 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PROCP04070 461 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ETV4P43268 484 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF438Q7Z4V0 828 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ADAMTSL2Q86TH1 951 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KLHDC8AQ8IYD2 350 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 MIER2Q8N344 545 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TRPC4Q9UBN4 977 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SPTY2D1-AS1A0A0U1RR47 76 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 GRID2O43424 1007 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KERAO60938 352 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 FNTBP49356 437 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 BLKP51451 505 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CTSCP53634 463 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 NCALDP61601 193 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 DMWDQ09019 674 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TEAD4Q15561 434 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 MUM1Q2TAK8 710 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ANKS6Q68DC2 871 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM207Q6UWW9 146 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 XKR5Q6UX68 686 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ZYG11AQ6WRX3 759 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 C4orf33Q8N1A6 199 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 KRT78Q8N1N4 520 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 UBTD2Q8WUN7 234 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ELMO1Q92556 727 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 OR2M4Q96R27 311 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 EFHD1Q9BUP0 239 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 LGR4Q9BXB1 951 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 EMCNQ9ULC0 261 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CDYLQ9Y232 598 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 FAM32AQ9Y421 112 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 OARD1Q9Y530 152 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SONP18583 2426 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 VILLO15195 856 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SP9P0CG40 484 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PCNAP12004 261 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 CCR7P32248 378 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 SERPINB5P36952 375 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 DNAJB13P59910 316 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ARHGAP8P85298 464 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 IRF9Q00978 393 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 LYSMD4Q5XG99 296 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 RGS9BPQ6ZS82 235 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PIM3Q86V86 326 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF547Q8IVP9 402 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TCAIMQ8N3R3 496 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TRIM55Q9BYV6 548 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PITPNM3Q9BZ71 974 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 TRNAU1APQ9NX07 287 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 PCOLCE2Q9UKZ9 415 aa8.24□□□□□ -1.09
PTPDC1-201ENST00000288976 GOLGA8QA0A0J9YX86 632 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 GSAPA4D1B5 854 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 GOLGA8OA6NCC3 632 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms