RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CAMK2GQ13555 558 aaPredicted RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 IKBKEQ14164 716 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 TGFBIQ15582 683 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 TECRLQ5HYJ1 363 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 PAQR9Q6ZVX9 377 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 CYS1Q717R9 158 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 TRIM48Q8IWZ4 208 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 C2orf73Q8N5S3 287 aaPredicted RBP12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 KDM1BQ8NB78 822 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 SUSD3Q96L08 255 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 COPS8Q99627 209 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 EBPLQ9BY08 206 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 POLE4Q9NR33 117 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 PEX16Q9Y5Y5 336 aa12.33□□□□□ -0.44
SLC6A1-201ENST00000287766 PRORSD1PA6NEY8 169 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 AP3D1O14617 1153 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CD36P16671 472 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GNPDA1P46926 289 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 PSMD4P55036 377 aaKnown RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GTF2H2Q13888 395 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GTF2H2CQ6P1K8 395 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 DOK6Q6PKX4 331 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 PRR23BQ6ZRT6 265 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MAVSQ7Z434 540 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 SPATA19Q7Z5L4 167 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 RBM4BQ9BQ04 359 aaKnown RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 RBM4Q9BWF3 364 aaKnown RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 OSGEPL1Q9H4B0 414 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 LRTM1Q9HBL6 345 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 LTBP3Q9NS15 1303 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 LAMB2P55268 1798 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GABRDO14764 452 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GKP32189 559 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 HSF2Q03933 536 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ACOX1Q15067 660 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MOGQ16653 247 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF678Q5SXM1 525 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 KIAA0319Q5VV43 1072 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 OLFML2AQ68BL7 652 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 OR52J3Q8NH60 311 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ZFP28Q8NHY6 868 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ROPN1LQ96C74 230 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 NSMCE3Q96MG7 304 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 SMIM14Q96QK8 99 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CORO1BQ9BR76 489 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 HMX1Q9NP08 348 aaPredicted RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 DLEC1Q9Y238 1755 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 COL6A1P12109 1028 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GABRR2P28476 465 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 TUBA3CQ13748 450 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF267Q14586 743 aaPredicted RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 PON2Q15165 354 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 XKR6Q5GH73 641 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 UBE2R2Q712K3 238 aaPredicted RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 LIX1Q8N485 282 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 TBC1D19Q8N5T2 526 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ART5Q96L15 291 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 HSPB11Q9Y547 144 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 A0A0J9YVX5 310 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ILVBLA1L0T0 632 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MTX2O75431 263 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CDK14O94921 469 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 GPIP06744 558 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CKBP12277 381 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MAGEA6P43360 314 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ANXA11P50995 505 aaKnown RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MAPK12P53778 367 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ELP6Q0PNE2 266 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 MYLK3Q32MK0 819 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 USP41Q3LFD5 358 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 NIPAL1Q6NVV3 410 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 ELMOD2Q8IZ81 293 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 SCLYQ96I15 445 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 SNX7Q9UNH6 387 aa12.32□□□□□ -0.44
SLC6A1-201ENST00000287766 PRAMEF33A0A0G2JMD5 474 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 OR2AG2A6NM03 316 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF99A8MXY4 864 aaPredicted RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 SEPT4O43236 478 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GJB3O75712 270 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 MYCLP1P12525 358 aaPredicted RBP12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 GMFBP60983 142 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 ZBTB6Q15916 424 aa12.31□□□□□ -0.44
SLC6A1-201ENST00000287766 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms