RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 GTF2IRD2BQ6EKJ0 949 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 FAM109BQ6ICB4 259 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 TAF2Q6P1X5 1199 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 MARK2Q7KZI7 788 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 NUP54Q7Z3B4 507 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 GTF2IRD2Q86UP8 949 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 SLC22A9Q8IVM8 553 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 SFTPA1Q8IWL2 248 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 DCP1BQ8IZD4 617 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 BATF2Q8N1L9 274 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ATP6V1C2Q8NEY4 427 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CENPIQ92674 756 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CMTM3Q96MX0 182 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 LENG8Q96PV6 779 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 RSRP1Q9BUV0 290 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ZNHIT2Q9UHR6 403 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ADAM28Q9UKQ2 775 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 FBXL21Q9UKT6 434 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 PLLPQ9Y342 182 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CPQQ9Y646 472 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 FAM47E-STBD1D6RA91 191 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 SMAD6O43541 496 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 MYO1DO94832 1006 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 MFN2O95140 757 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ZBTB11O95625 1053 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 OAS1P00973 400 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CNPP09543 421 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CCDC166P0CW27 439 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ETS2P15036 469 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 NUDT2P50583 147 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 DGKEP52429 567 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 S100A12P80511 92 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 LACTB2Q53H82 288 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 ARL13AQ5H913 290 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 PLPP4Q5VZY2 271 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 SH2D5Q6ZV89 423 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 RRM2BQ7LG56 351 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 DEFB107AQ8IZN7 70 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 PARP8Q8N3A8 854 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 TDRD5Q8NAT2 981 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 PIK3C3Q8NEB9 887 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 LILRB4Q8NHJ6 448 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 CIDECQ96AQ7 238 aaPredicted RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 GRAMD1AQ96CP6 724 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 MTIF3Q9H2K0 278 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 GHITMQ9H3K2 345 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 C11orf16Q9NQ32 467 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 KLHL1Q9NR64 748 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 GDAP2Q9NXN4 497 aa3.65□□□□□ -1.82
RAB3C-201ENST00000282878 USP36Q9P275 1121 aaKnown RBP3.65□□□□□ -1.82
RAB3C-201ENST00000282878 LCHNA4D1U4 455 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 ENO4A6NNW6 628 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CD46P15529 392 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CCNA2P20248 432 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 ITGALP20701 1170 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 GP5P40197 560 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 SERPINB8P50452 374 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CBLBQ13191 982 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 BTG3Q14201 252 aaPredicted RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 USF2Q15853 346 aaPredicted RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TMEM31Q5JXX7 168 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 USP53Q70EK8 1073 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 LIMS2Q7Z4I7 341 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TSPAN33Q86UF1 283 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CLEC4FQ8N1N0 589 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 ANKFN1Q8N957 763 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TTC29Q8NA56 475 aaPredicted RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 ARRDC2Q8TBH0 407 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CORO1BQ9BR76 489 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 FBXO5Q9UKT4 447 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TRBV23OR9-2A0A075B6M9 112 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 BTBD17A6NE02 478 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 NPEPPSL1A6NEC2 478 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 E7ESA3 106 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 FPGTO14772 594 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 NIPSNAP2O75323 286 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 PLGP00747 810 aaPredicted RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 OPN1LWP04000 364 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 HNRNPA1P09651 372 aaKnown RBP eCLIP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 PTBP1P26599 531 aaKnown RBP eCLIP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 CORO1AP31146 461 aaKnown RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 PCBP2Q15366 365 aaKnown RBP eCLIP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 GPAT3Q53EU6 434 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 MARC1Q5VT66 337 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 MACC1Q6ZN28 852 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TSPYL5Q86VY4 417 aaPredicted RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 FRMD1Q8N878 549 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 OR4K2Q8NGD2 314 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 MIEF2Q96C03 454 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 FAM120BQ96EK7 910 aaKnown RBP3.65□□□□□ -1.83
RAB3C-201ENST00000282878 NSL1Q96IY1 281 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 C3orf30Q96M34 536 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 HIPK3Q9H422 1215 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 NMRAL1Q9HBL8 299 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TRIM39Q9HCM9 518 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 TMEM39AQ9NV64 488 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 EXD2Q9NVH0 621 aa3.65□□□□□ -1.83
RAB3C-201ENST00000282878 COCHO43405 550 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms