RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 P2RY8Q86VZ1 359 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 ARMC8Q8IUR7 673 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 OR2T12Q8NG77 320 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 FUBP1Q96AE4 644 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 CLSTN3Q9BQT9 956 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 THUMPD3Q9BV44 507 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 DSN1Q9H410 356 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 THG1LQ9NWX6 298 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 PCTPQ9UKL6 214 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 FNDC3AQ9Y2H6 1198 aaKnown RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 HS3ST4Q9Y661 456 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 COL4A6Q14031 1691 aa11.13□□□□□ -0.63
SCLT1-201ENST00000281142 NUP214P35658 2090 aaPredicted RBP11.13□□□□□ -0.63
SCLT1-201ENST00000281142 BTN3A1O00481 513 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 BCKDKO14874 412 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 KERAO60938 352 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 HPRP00739 348 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 LCKP06239 509 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 EPHA2P29317 976 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SLC26A3P40879 764 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 EIF2DP41214 584 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 GATMP50440 423 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CLCNKBP51801 687 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 DEFB103AP81534 67 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ILF2Q12905 390 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 PTGR1Q14914 329 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 LETMD1Q6P1Q0 360 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 DCP2Q8IU60 420 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 LYSMD2Q8IV50 215 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SIX5Q8N196 739 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TSPEARQ8WU66 669 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 AARSD1Q9BTE6 412 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TRIT1Q9H3H1 467 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TFB2MQ9H5Q4 396 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ABHD14A-ACY1A0A1B0GW23 586 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SLC22A1O15245 554 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 NUAK1O60285 661 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 DLGAP3O95886 979 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ACVR2AP27037 513 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ERVPABLB-1P60509 514 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 WDR5P61964 334 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RFTN2Q52LD8 501 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF548Q8NEK5 533 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ELMO1Q92556 727 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 KIAA1191Q96A73 305 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CYP2S1Q96SQ9 504 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 GPR21Q99679 349 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CATSPERBQ9H7T0 1116 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SLC6A13Q9NSD5 602 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ACTL7AQ9Y615 435 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 A0A0U1RQS6 177 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ILVBLA1L0T0 632 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TYW5A2RUC4 315 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SSX4O60224 188 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TSPAN3O60637 253 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 VPS4BO75351 444 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 KATNA1O75449 491 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 B3GALT4O96024 378 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CNPP09543 421 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 UROSP10746 265 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 SCNN1GP51170 649 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 GBX1Q14549 363 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CLCA4Q14CN2 919 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ALFQ53S48 1182 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CYP20A1Q6UW02 462 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 DET1Q7L5Y6 550 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CYP4Z1Q86W10 505 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CIR1Q86X95 450 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RTL3Q8N8U3 475 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 POC5Q8NA72 575 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RHEBL1Q8TAI7 183 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 STAG3L4Q8TBR4 150 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 HASPINQ8TF76 798 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RBM4BQ9BQ04 359 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 RBM4Q9BWF3 364 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ELAC1Q9H777 363 aaKnown RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ZBTB20Q9HC78 741 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 ZIM2Q9NZV7 527 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CXXC1Q9P0U4 656 aaPredicted RBP11.12□□□□□ -0.63
SCLT1-201ENST00000281142 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
SCLT1-201ENST00000281142 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 SNPHO15079 494 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 MUSKO15146 869 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 DIRAS1O95057 198 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 POMCP01189 267 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 FGBP02675 491 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 POLR2EP19388 210 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms