RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZHX1-C8orf76Q96EF9 292 aa11.07□□□□□ -0.64
USP6NL-201ENST00000277575 CCM2Q9BSQ5 444 aa11.07□□□□□ -0.64
USP6NL-201ENST00000277575 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
USP6NL-201ENST00000277575 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
USP6NL-201ENST00000277575 MRPS7Q9Y2R9 242 aaKnown RBP11.07□□□□□ -0.64
USP6NL-201ENST00000277575 FAM234BA2RU67 622 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 LCHNA4D1U4 455 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 FAM86C2PA6NEL3 165 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PAPSS2O95340 614 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 IFNGP01579 166 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 FABP3P05413 133 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 RHOP08100 348 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 HOXB2P14652 356 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PROZP22891 400 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 NDUFS1P28331 727 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 ATP12AP54707 1039 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 MTPNP58546 118 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 KHDC1Q4VXA5 237 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 C11orf88Q6PI97 169 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 SLC38A4Q969I6 547 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 CENPNQ96H22 339 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 CNPPD1Q9BV87 410 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PSAT1Q9Y617 370 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 MYH10P35580 1976 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF840PA6NDX5 716 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 SAP18O00422 153 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 KRT33AO76009 404 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 TGFB1P01137 390 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 NCK1P16333 377 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PRPS1L1P21108 318 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 GKP32189 559 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 SLC18A2Q05940 514 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PRAMEF14Q5SWL7 426 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 GPRC6AQ5T6X5 926 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 PRAMEF13Q5VWM6 474 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 FRG2Q64ET8 278 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 POMZP3Q6PJE2 187 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 CAND1Q86VP6 1230 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 IZUMO1Q8IYV9 350 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 FRG2BQ96QU4 278 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 RBM4BQ9BQ04 359 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 RBM4Q9BWF3 364 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 MRPS26Q9BYN8 205 aaKnown RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 BTBD1Q9H0C5 482 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 KPNA4O00629 521 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 IGDCC3Q8IVU1 814 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 UXS1Q8NBZ7 420 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 FAM46DQ8NEK8 389 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 KBTBD8Q8NFY9 601 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 OR52B2Q96RD2 323 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 AKTIPQ9H8T0 292 aa11.06□□□□□ -0.64
USP6NL-201ENST00000277575 IFT80Q9P2H3 777 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF624Q9P2J8 865 aaPredicted RBP11.06□□□□□ -0.64
USP6NL-201ENST00000277575 TEX28O15482 410 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 ZBTB11O95625 1053 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF8P17098 575 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 GJA5P36382 358 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 CCR8P51685 355 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 MORN1Q5T089 497 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 CADM2Q8N3J6 435 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 FAM81AQ8TBF8 368 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 KBTBD7Q8WVZ9 684 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 RASSF5Q8WWW0 418 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 ZCCHC3Q9NUD5 404 aaKnown RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 SMPD3Q9NY59 655 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 CALML5Q9NZT1 146 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 CFAP20Q9Y6A4 193 aaKnown RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 FADS2P1A8MWK0 482 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 ADAMDEC1O15204 470 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 SLC22A2O15244 555 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 TULP3O75386 442 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 THRBP10828 461 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 IGFALSP35858 605 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 SLC26A3P40879 764 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 GDF5P43026 501 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 RPS9P46781 194 aaKnown RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 YAP1P46937 504 aaKnown RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 CREB5Q02930 508 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 DCST1Q5T197 706 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 HEATR4Q86WZ0 1026 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 SLC34A3Q8N130 599 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 TMEM145Q8NBT3 493 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 FAM98AQ8NCA5 519 aaKnown RBP11.05□□□□□ -0.64
USP6NL-201ENST00000277575 PIK3C3Q8NEB9 887 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 SMPDL3AQ92484 453 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 IGSF8Q969P0 613 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 ADAP2Q9NPF8 381 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 EHD3Q9NZN3 535 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 PPM1HQ9ULR3 514 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 PRKAB1Q9Y478 270 aa11.05□□□□□ -0.64
USP6NL-201ENST00000277575 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms