RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 DPYSL3Q14195 570 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 IL11RAQ14626 422 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 ZXDCQ2QGD7 858 aaPredicted RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 NCBP2-AS2Q69YL0 99 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 TRIM74Q86UV6 250 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 KCTD6Q8NC69 237 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 LPCAT1Q8NF37 534 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 LCORQ96JN0 433 aaPredicted RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 NFKBIL1Q9UBC1 381 aaPredicted RBP9.51□□□□□ -0.89
LRTM1-201ENST00000273286 CPNE7Q9UBL6 633 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 CHKBQ9Y259 395 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 NBASA2RRP1 2371 aa9.51□□□□□ -0.89
LRTM1-201ENST00000273286 A8MU76 341 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ZNF487B1APH4 448 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 PRLP01236 227 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 C9P02748 559 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 MT-ND3P03897 115 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 SKILP12757 684 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 VCLP18206 1134 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 TCN2P20062 427 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ZBED6P86452 979 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 NFATC2Q13469 925 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ZNF569Q5MCW4 686 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 TXNRD3NBQ6F5E7 133 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ALKBH5Q6P6C2 394 aaKnown RBP9.5□□□□□ -0.89
LRTM1-201ENST00000273286 VSIG1Q86XK7 387 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 TRIM48Q8IWZ4 208 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 CCNYQ8ND76 341 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ARRDC2Q8TBH0 407 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 STARD8Q92502 1023 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 FAF2Q96CS3 445 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 AGAP2Q99490 1192 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 TRIM39Q9HCM9 518 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 POT1Q9NUX5 634 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 UVRAGQ9P2Y5 699 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 KCND3Q9UK17 655 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 KCNK6Q9Y257 313 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 PLEKHM1Q9Y4G2 1056 aa9.5□□□□□ -0.89
LRTM1-201ENST00000273286 MKRN2OSH3BPM6 223 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 CHUKO15111 745 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 KMOO15229 486 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 VEGFDO43915 354 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 DLX3O60479 287 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 KCNJ13O60928 360 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 PROSCO94903 275 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 SLC25A14O95258 325 aaPredicted RBP9.49□□□□□ -0.89
LRTM1-201ENST00000273286 VIPP01282 170 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 HLA-DQB2P05538 268 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 ARSEP51690 589 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 UBE2IP63279 158 aaKnown RBP9.49□□□□□ -0.89
LRTM1-201ENST00000273286 IFI35P80217 286 aaPredicted RBP9.49□□□□□ -0.89
LRTM1-201ENST00000273286 PTPRRQ15256 657 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 INSCQ1MX18 579 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 CCDC70Q6NSX1 233 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 WASH2PQ6VEQ5 465 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 RFLNAQ6ZTI6 216 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 TRAM1L1Q8N609 369 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 PHOSPHO1Q8TCT1 267 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 C9orf72Q96LT7 481 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 WDR24Q96S15 920 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 TIMM29Q9BSF4 260 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 SPATA16Q9BXB7 569 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 ULBP3Q9BZM4 244 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 RAB33BQ9H082 229 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 BRD8Q9H0E9 1235 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 MAGEE1Q9HCI5 957 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 SIDT1Q9NXL6 827 aaKnown RBP9.49□□□□□ -0.89
LRTM1-201ENST00000273286 LUC7L2Q9Y383 392 aaKnown RBP9.49□□□□□ -0.89
LRTM1-201ENST00000273286 RPS6KL1Q9Y6S9 549 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 DOPEY2Q9Y3R5 2298 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 FLNCQ14315 2725 aa9.49□□□□□ -0.89
LRTM1-201ENST00000273286 A0A0U1RQS6 177 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 GOLGA6L3A6NEY3 463 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 PPP1R12AO14974 1030 aaPredicted RBP9.48□□□□□ -0.89
LRTM1-201ENST00000273286 NKX2-8O15522 239 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 SNX2O60749 519 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 UBXN7O94888 489 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 EML2O95834 649 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 CD48P09326 243 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 H2AFZP0C0S5 128 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 ZFXP17010 805 aaPredicted RBP9.48□□□□□ -0.89
LRTM1-201ENST00000273286 CD86P42081 329 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 MAPK9P45984 424 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 PPIDQ08752 370 aaKnown RBP9.48□□□□□ -0.89
LRTM1-201ENST00000273286 KLRB1Q12918 225 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 LACTB2Q53H82 288 aaPredicted RBP9.48□□□□□ -0.89
LRTM1-201ENST00000273286 COLEC12Q5KU26 742 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 ZDHHC20Q5W0Z9 365 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 KLHL35Q6PF15 583 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 ABRAXAS1Q6UWZ7 409 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 TMEM26Q6ZUK4 368 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 H2AFVQ71UI9 128 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 LRRTM4Q86VH4 590 aa9.48□□□□□ -0.89
LRTM1-201ENST00000273286 PTRH1Q86Y79 214 aaKnown RBP9.48□□□□□ -0.89
LRTM1-201ENST00000273286 CTNNBL1Q8WYA6 563 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms