RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NECAB2Q7Z6G3 386 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 CYP4Z1Q86W10 505 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 FAM120BQ96EK7 910 aaKnown RBP16.45■□□□□ 0.22
SQLE-201ENST00000265896 RNF38Q9H0F5 515 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
SQLE-201ENST00000265896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 STX16O14662 325 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 PER2O15055 1255 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SMAD6O43541 496 aaKnown RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 ACSL4O60488 711 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 AKT1P31749 480 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SEPHS1P49903 392 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SLC13A2Q13183 592 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ZNF177Q13360 481 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 ADPRMQ3LIE5 342 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SOWAHCQ53LP3 525 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 GALNT7Q86SF2 657 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 LMNTD1Q8N9Z9 388 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 WFDC5Q8TCV5 224 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 MYLIPQ8WY64 445 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 RHBDF1Q96CC6 855 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ZBTB18Q99592 522 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 OSBPL10Q9BXB5 764 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ZNF639Q9UID6 485 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 KRBA1A5PL33 1030 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 CREG1O75629 220 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SERPINB7O75635 380 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 TNFRSF1BP20333 461 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ITPKAP23677 461 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 DSC3Q14574 896 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 DOK6Q6PKX4 331 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 RBM12BQ8IXT5 1001 aaKnown RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SCML4Q8N228 414 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 CLPBQ9H078 707 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 VPS51Q9UID3 782 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 M0R3G1 203 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 PRMT5O14744 637 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 BCKDKO14874 412 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 ANGPTL1O95841 491 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 HPCAL1P37235 193 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 CD97P48960 835 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 YBEYP58557 167 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 RHOAP61586 193 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 CYP4F2P78329 520 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 PPP2R2BQ00005 443 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 RAB2BQ8WUD1 216 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 LZICQ8WZA0 190 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 HTRA1Q92743 480 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 HPS1Q92902 700 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 FOXJ1Q92949 421 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 FKBP10Q96AY3 582 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 SH3YL1Q96HL8 342 aaPredicted RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 TPD52L3Q96J77 140 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 BBS2Q9BXC9 721 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 NUSAP1Q9BXS6 441 aaKnown RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 OPTCQ9UBM4 332 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 DNAJB9Q9UBS3 223 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 PAIP2BQ9ULR5 123 aaKnown RBP16.44■□□□□ 0.22
SQLE-201ENST00000265896 ERGIC3Q9Y282 383 aa16.44■□□□□ 0.22
SQLE-201ENST00000265896 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 PATJQ8NI35 1801 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 CBFA2T3O75081 653 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 NDUFS2O75306 463 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 OAZ2O95190 189 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 FKBP9O95302 570 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 NTRK1P04629 796 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 LCKP06239 509 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 PORP16435 677 aaPredicted RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 TYMPP19971 482 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 NKX2-5P52952 324 aaPredicted RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 ISL1P61371 349 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 HSPA14Q0VDF9 509 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 OR4F3Q6IEY1 312 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 FKBP9P1Q75LS8 142 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 FAM210AQ96ND0 272 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 ATG10Q9H0Y0 220 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 PARVBQ9HBI1 364 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 COCHO43405 550 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 CPSF4O95639 269 aaKnown RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 EPOP01588 193 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 BCKDHAP12694 445 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 ZCCHC8Q6NZY4 707 aaKnown RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 RNF168Q8IYW5 571 aaPredicted RBP16.43■□□□□ 0.22
SQLE-201ENST00000265896 ARL10Q8N8L6 244 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 OR7A2PQ8NGA2 310 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 C8orf48Q96LL4 319 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 UGT2B28Q9BY64 529 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 CD84Q9UIB8 345 aa16.43■□□□□ 0.22
SQLE-201ENST00000265896 EIF3LQ9Y262 564 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms