RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 C20orf27Q9GZN8 174 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 SLCO1B3Q9NPD5 702 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 IMP3Q9NV31 184 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 UCKL1Q9NWZ5 548 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 ARL15Q9NXU5 204 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TAAR2Q9P1P5 351 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 ASF1AQ9Y294 204 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 TDRKHQ9Y2W6 561 aaKnown RBP9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
SNRNP40-201ENST00000263694 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 GOLGA4Q13439 2230 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PCM1Q15154 2024 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 SYCE1LA8MT33 242 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 IFRD1O00458 451 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PPP6CO00743 305 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC16A5O15375 505 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 KCNJ13O60928 360 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 IPO13O94829 963 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 CATP04040 527 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 GNSP15586 552 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 MAP4P27816 1152 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 EEF1DP29692 281 aaKnown RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 LSP1P33241 339 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 CTSKP43235 329 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PRKAA2P54646 552 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PLOD1Q02809 727 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 BST1Q10588 318 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 LRP8Q14114 963 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 GRB7Q14451 532 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 TEAD4Q15561 434 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 UAP1L1Q3KQV9 507 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 UNC50Q53HI1 259 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 LIPMQ5VYY2 423 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM47EQ6ZV65 393 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 C2orf73Q8N5S3 287 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PPFIBP2Q8ND30 876 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 OR2I1PQ8NGU4 316 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PPP1R14CQ8TAE6 165 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 MCOLN3Q8TDD5 553 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 PYCR2Q96C36 320 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 RHBDF1Q96CC6 855 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 FOPNLQ96NB1 174 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 IL17FQ96PD4 163 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 TMEM79Q9BSE2 394 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 HGH1Q9BTY7 390 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 GSDMCQ9BYG8 508 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 ATG10Q9H0Y0 220 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 ABCF3Q9NUQ8 709 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 NUDT4Q9NZJ9 180 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF624Q9P2J8 865 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 LAMA1P25391 3075 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 ARID1BQ8NFD5 2236 aaPredicted RBP9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 MYO15AQ9UKN7 3530 aa9.48□□□□□ -0.89
SNRNP40-201ENST00000263694 KLHL33A6NCF5 533 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 A6NCN8 305 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 PRR5-ARHGAP8B1AHC4 643 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 KLK8O60259 260 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 S100BP04271 92 aaPredicted RBP9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 CHRNGP07510 517 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 HIST1H2AGP0C0S8 130 aaPredicted RBP9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 HIST1H2ADP20671 130 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 IMPDH1P20839 514 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 CYP2A7P20853 494 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 HSPA7P48741 367 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 BLKP51451 505 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 CDH13P55290 713 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 STX3Q13277 289 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 SP140Q13342 867 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 SHBQ15464 509 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF678Q5SXM1 525 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 ABRAXAS1Q6UWZ7 409 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 LRRC34Q8IZ02 419 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF548Q8NEK5 533 aaPredicted RBP9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM46DQ8NEK8 389 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 OR6Y1Q8NGX8 325 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 LRRC8CQ8TDW0 803 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 HIST1H2AHQ96KK5 128 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 HIST1H2AJQ99878 128 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 H2AFJQ9BTM1 129 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 ARRDC1-AS1Q9H2J1 176 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 XKR8Q9H6D3 395 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 IL21RQ9HBE5 538 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 RDH14Q9HBH5 336 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 WWOXQ9NZC7 414 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 MID2Q9UJV3 735 aa9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 PTBP2Q9UKA9 531 aaKnown RBP9.47□□□□□ -0.89
SNRNP40-201ENST00000263694 A0A1B0GTL3 188 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 B4DGG1 531 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 YY2O15391 372 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 AQP9O43315 295 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 CCNT2O60583 730 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SUPT7LO94864 414 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC16A8O95907 504 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SERPINE1P05121 402 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 ANXA5P08758 320 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 ENO2P09104 434 aaPredicted RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 MTHFD1P11586 935 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms