RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 PSIP1O75475 530 aaKnown RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 F2P00734 622 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 TNFP01375 233 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 LCN1P1Q5VSP4 162 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 SLC30A8Q8IWU4 369 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 CYB5D2Q8WUJ1 264 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 CCM2Q9BSQ5 444 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 MBD2Q9UBB5 411 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 PLOD3O60568 738 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 RBMXL2O75526 392 aaKnown RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 TCEA3O75764 348 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ANGPTL1O95841 491 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ALPIP09923 528 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 SLC11A1P49279 550 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 AP1S2P56377 157 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 PAQR3Q6TCH7 311 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 FAM131AQ6UXB0 335 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ADAP2Q9NPF8 381 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ING4Q9UNL4 249 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 TESMINQ9Y4I5 508 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 TMEM63AO94886 807 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 NCBP2P52298 156 aaKnown RBP eCLIP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 MLLT6P55198 1093 aaPredicted RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 HERVK_113P63132 956 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 SMCO1Q147U7 214 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ERVK-6Q9BXR3 956 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 THUMPD1Q9NXG2 353 aaKnown RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 HS3ST4Q9Y661 456 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 A0A1W2PRB8 838 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 B4DGG1 531 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ABLIM1O14639 778 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 NIPSNAP2O75323 286 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ALOX5P09917 674 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 YAP1P46937 504 aaKnown RBP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 KCNQ1P51787 676 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 SLBPQ14493 270 aaKnown RBP eCLIP16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 PRAMEF14Q5SWL7 426 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 PRAMEF13Q5VWM6 474 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 Q6ZVU0 165 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 ART5Q96L15 291 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 BTBD1Q9H0C5 482 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 GRHL1Q9NZI5 618 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 DHRS7Q9Y394 339 aa16.54■□□□□ 0.24
CROCCP3-201ENST00000263511 OR51F1A6NGY5 319 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 C9J4A7 227 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 PPEF2O14830 753 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ALPPP05187 535 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ZNF30P17039 623 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 CSNK2A2P19784 350 aaPredicted RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 NRG3P56975 720 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 BNIP1Q12981 228 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 MYLK3Q32MK0 819 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 CXorf57Q6NSI4 855 aaKnown RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 CDH24Q86UP0 819 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 TMEM145Q8NBT3 493 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 HCAR2Q8TDS4 363 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 BCO2Q9BYV7 579 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ATXN10Q9UBB4 475 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 DMTF1Q9Y222 760 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 FAM234BA2RU67 622 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 HAS3O00219 553 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 SLC30A4O14863 429 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 EFNA1P20827 205 aaPredicted RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 IMPDH1P20839 514 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 PDX1P52945 283 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 NFKB2Q00653 900 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ZNF792Q3KQV3 632 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 SIRPB2Q5JXA9 342 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 NATD1Q8N6N6 113 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ZNF461Q8TAF7 563 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 NSMCE3Q96MG7 304 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 USP29Q9HBJ7 922 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 UBAP1Q9NZ09 502 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 LOC110117498-PIK3R3F6TDL0 507 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ZNF823P16415 610 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 AGXTP21549 392 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 IL1R2P27930 398 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ERVK-8P63133 956 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 RALGPS1Q5JS13 557 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 PRR23BQ6ZRT6 265 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 TRIM2Q9C040 744 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 WDR12Q9GZL7 423 aaKnown RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 RAB26Q9ULW5 256 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 CPED1A4D0V7 1026 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 FOXO6A8MYZ6 492 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 SLC22A2O15244 555 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 INPPL1O15357 1258 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 GADD45GO95257 159 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 ZNF8P17098 575 aaPredicted RBP16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 CHRNA6Q15825 494 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
CROCCP3-201ENST00000263511 FBXL12Q9NXK8 326 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms