RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PIRTP0C851 137 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TCN2P20062 427 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TYK2P29597 1187 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 LEPRP48357 1165 aaKnown RBP13.04□□□□□ -0.32
SGCA-201ENST00000262018 CD151P48509 253 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 SRP54P61011 504 aaKnown RBP13.04□□□□□ -0.32
SGCA-201ENST00000262018 PRAMEP78395 509 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 B4GALNT1Q00973 533 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 C14orf28Q4W4Y0 310 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 ARMC12Q5T9G4 340 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
SGCA-201ENST00000262018 ZNF470Q6ECI4 717 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 BRAT1Q6PJG6 821 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 OGFOD3Q6PK18 319 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TAF8Q7Z7C8 310 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 CPLX4Q7Z7G2 160 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 TTC30BQ8N4P2 665 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 PAF1Q8N7H5 531 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 FAM46DQ8NEK8 389 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 PIH1D2Q8WWB5 315 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 ECHDC3Q96DC8 303 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 CCDC74BQ96LY2 380 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 EFHD1Q9BUP0 239 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 DDA1Q9BW61 102 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 C1QTNF7Q9BXJ2 289 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 C12orf65Q9H3J6 166 aaKnown RBP13.04□□□□□ -0.32
SGCA-201ENST00000262018 F8P00451 2351 aa13.04□□□□□ -0.32
SGCA-201ENST00000262018 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 C2orf81A6NN90 581 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 TM7SF2O76062 418 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 KIAA0754O94854 1291 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 GOT2P00505 430 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 GSTA1P08263 222 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 VIMP08670 466 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 SUOXP51687 545 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 OR1D5P58170 312 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 POLR2LP62875 67 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 MC1RQ01726 317 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 IRF4Q15306 451 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 EIF2S3LQ2VIR3 472 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 CMC1Q7Z7K0 106 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 CILP2Q8IUL8 1156 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 TP53I13Q8NBR0 393 aaPredicted RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 ACVR1CQ8NER5 493 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 OR13C4Q8NGS5 318 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 OR6P1Q8NGX9 317 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 PDCD6IPQ8WUM4 868 aaKnown RBP13.03□□□□□ -0.32
SGCA-201ENST00000262018 STARD8Q92502 1023 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 CDKN2AIPNLQ96HQ2 116 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 ASPSCR1Q9BZE9 553 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 MAGEE1Q9HCI5 957 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 KLQ9UEF7 1012 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 KCNMB2Q9Y691 235 aa13.03□□□□□ -0.32
SGCA-201ENST00000262018 OTOGQ6ZRI0 2925 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 FAM95CA0A1B0GW59 222 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 CCL22O00626 93 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 AURKAO14965 403 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 BUD23O43709 281 aaKnown RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 NUDT21O43809 227 aaKnown RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 TNFP01375 233 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 LPOP22079 712 aaPredicted RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 HTR1BP28222 390 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 ALDH4A1P30038 563 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.33
SGCA-201ENST00000262018 SERPINB4P48594 390 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 EPHB1P54762 984 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 PTPRCAPQ14761 206 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 DBN1Q16643 649 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 DCAF12Q5T6F0 453 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 NLGN4XQ8N0W4 816 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 NLGN4YQ8NFZ3 816 aaPredicted RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 SMIM14Q96QK8 99 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 C19orf43Q9BQ61 176 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 DPEP2Q9H4A9 486 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 FBXO6Q9NRD1 293 aaPredicted RBP13.02□□□□□ -0.33
SGCA-201ENST00000262018 PILRAQ9UKJ1 303 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
SGCA-201ENST00000262018 A0A096LPK6 155 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 H7C0S8 307 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 BIRC5O15392 142 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 CD3EAPO15446 510 aaKnown RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 HAUS5O94927 633 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 S1PR4O95977 384 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 C2P06681 752 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 NFKBIAP25963 317 aa13.01□□□□□ -0.33
SGCA-201ENST00000262018 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
SGCA-201ENST00000262018 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms