RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LYSMD3Q7Z3D4 306 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 OR13J1Q8NGT2 312 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 EBPLQ9BY08 206 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 AGPAT4Q9NRZ5 378 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 RBPJLQ9UBG7 517 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 PHLPP1O60346 1717 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 ISPDA4D126 451 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 ACOT8O14734 319 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 ADAMDEC1O15204 470 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 OR4Q2P0C623 313 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 ARSAP15289 507 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 RHOQP17081 205 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 AGXTP21549 392 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 PSEN2P49810 448 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 DGKEP52429 567 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 UGT2B15P54855 530 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.92■□□□□ 0.141e-7■■■■□ 25.2
SREBF1-201ENST00000261646 CPTPQ5TA50 214 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 BICRALQ6AI39 1079 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 OR6K2Q8NGY2 324 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 SLC30A2Q9BRI3 323 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 CIPCQ9C0C6 399 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 SLC22A4Q9H015 551 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 AASDHPPTQ9NRN7 309 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 HSPB11Q9Y547 144 aa15.92■□□□□ 0.14
SREBF1-201ENST00000261646 CNTN5O94779 1100 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 HCAR3P49019 387 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CASP9P55211 416 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CLCA4Q14CN2 919 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 DEF8Q6ZN54 512 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ANKS3Q6ZW76 656 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF534Q76KX8 674 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 HS3ST5Q8IZT8 346 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 SPARTQ8N0X7 666 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 C11orf65Q8NCR3 313 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CDKN2AIPNLQ96HQ2 116 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 IL4I1Q96RQ9 567 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CYP2S1Q96SQ9 504 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 UCKL1Q9NWZ5 548 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 TRPM5Q9NZQ8 1165 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 VPS4AQ9UN37 437 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ERN1O75460 977 aaKnown RBP15.91■□□□□ 0.14
SREBF1-201ENST00000261646 INHBEP58166 350 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 MTA1Q13330 715 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 TUBB3Q13509 450 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 TUBA3EQ6PEY2 450 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 MON1AQ86VX9 555 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 GOLM1Q8NBJ4 401 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF671Q8TAW3 534 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 NAV1Q8NEY1 1877 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 DNAJB5O75953 348 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CLDN9O95484 217 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ITGB1P05556 798 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 OGNP20774 298 aaKnown RBP15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
SREBF1-201ENST00000261646 RNASE12Q5GAN4 147 aaKnown RBP15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ELMOD2Q8IZ81 293 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 RBFAQ8N0V3 343 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 OR8H3Q8N146 312 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 ANGPT4Q9Y264 503 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 CITO14578 2027 aa15.91■□□□□ 0.14
SREBF1-201ENST00000261646 AQP9O43315 295 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PBX3P40426 434 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 ACLYP53396 1101 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 TSTQ16762 297 aaKnown RBP15.9■□□□□ 0.14
SREBF1-201ENST00000261646 FAM171A1Q5VUB5 890 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 MFSD14CQ5VZR4 134 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 TRIM40Q6P9F5 258 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 TSPEARQ8WU66 669 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 TMEM203Q969S6 136 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PYURFQ96I23 114 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 NLNQ9BYT8 704 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 ATG10Q9H0Y0 220 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 MED28Q9H204 178 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 TP63Q9H3D4 680 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-201ENST00000261646 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.9■□□□□ 0.144e-6■□□□□ 10.2
SREBF1-201ENST00000261646 ZSCAN5BA6NJL1 495 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 MAGEB17A8MXT2 336 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PRKAG1P54619 331 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF45Q02386 682 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PTGR1Q14914 329 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 DUS1LQ6P1R4 473 aaKnown RBP15.9■□□□□ 0.14
SREBF1-201ENST00000261646 USP30Q70CQ3 517 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 NDNFQ8TB73 568 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 SLC30A3Q99726 388 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 CCDC177Q9NQR7 707 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-201ENST00000261646 NECTIN3Q9NQS3 549 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PCDHGA8Q9Y5G5 932 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 J3KR12 359 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 KPNA6O60684 536 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF24P17028 368 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 FPR1P21462 350 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 DCKP27707 260 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 RFX3P48380 749 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF280AP59817 542 aaPredicted RBP15.9■□□□□ 0.14
SREBF1-201ENST00000261646 DSC3Q14574 896 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 FRS2Q8WU20 508 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 SLC38A4Q969I6 547 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
SREBF1-201ENST00000261646 PDLIM7Q9NR12 457 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms