RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MAT1AQ00266 395 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 COG2Q14746 738 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 HYAL4Q2M3T9 481 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 FAM76BQ5HYJ3 339 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 HECTD3Q5T447 861 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 C6orf163Q5TEZ5 329 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF713Q8N859 430 aaPredicted RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 TRIML1Q8N9V2 468 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 PPFIBP2Q8ND30 876 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 KLHDC9Q8NEP7 349 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 Q8NFD4 153 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 OR2T12Q8NG77 320 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 OR6J1Q8NGC5 347 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 FGFBP3Q8TAT2 258 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ATP6V1E2Q96A05 226 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 TRMT61BQ9BVS5 477 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 EDEM3Q9BZQ6 932 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ZBTB20Q9HC78 741 aaPredicted RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ZCCHC17Q9NP64 241 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 LRWD1Q9UFC0 647 aa4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ZHX1Q9UKY1 873 aaPredicted RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 ABT1Q9ULW3 272 aaKnown RBP4.14□□□□□ -1.75
CCDC54-201ENST00000261058 SYNCRIPO60506 623 aaKnown RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 APOA4P06727 396 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 QDPRP09417 244 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 FGF5P12034 268 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ACHEP22303 614 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 PCGF2P35227 344 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF75DP51815 510 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF131P52739 623 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 DMP1Q13316 513 aaPredicted RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ZKSCAN8Q15776 578 aaPredicted RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ASPRV1Q53RT3 343 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 RUSC1-AS1Q66K80 236 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 PLA2G4FQ68DD2 849 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ANO5Q75V66 913 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 SLFN11Q7Z7L1 901 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 PLD3Q8IV08 490 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 DHX58Q96C10 678 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 SLC47A1Q96FL8 570 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ST6GAL2Q96JF0 529 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF583Q96ND8 569 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 MUS81Q96NY9 551 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 NUP85Q9BW27 656 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 XPO4Q9C0E2 1151 aaKnown RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 MMP28Q9H239 520 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 OPA3Q9H6K4 179 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 PELI2Q9HAT8 420 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 Q9N2K0 584 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 MYNNQ9NPC7 610 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 SLC38A7Q9NVC3 462 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 DPP3Q9NY33 737 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.13□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF112Q9UJU3 913 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 MTUS1Q9ULD2 1270 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 GPRASP1Q5JY77 1395 aa4.13□□□□□ -1.75
CCDC54-201ENST00000261058 HYKKA2RU49 373 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 E9PI62 339 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 HTATSF1O43719 755 aaKnown RBP4.12□□□□□ -1.75
CCDC54-201ENST00000261058 XPNPEP2O43895 674 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 IGHV2-70P01814 119 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 MSH3P20585 1137 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 MPZP25189 248 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 EPHA2P29317 976 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 ERC1Q8IUD2 1116 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 FAM114A1Q8IWE2 563 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 OR13J1Q8NGT2 312 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 OLIG1Q8TAK6 271 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 ALG14Q96F25 216 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 FER1L6-AS2Q96M78 137 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SPAG5Q96R06 1193 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SEPHS2Q99611 448 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 TFB2MQ9H5Q4 396 aaKnown RBP4.12□□□□□ -1.75
CCDC54-201ENST00000261058 DBNDD1Q9H9R9 158 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 OLFML3Q9NRN5 406 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 RAI14Q9P0K7 980 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 B3GAT1Q9P2W7 334 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SLC24A2Q9UI40 661 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 LIPGQ9Y5X9 500 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 FAM172BPA6NC97 362 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 P2RY10O00398 339 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 GAPDHSO14556 408 aaPredicted RBP4.12□□□□□ -1.75
CCDC54-201ENST00000261058 CYP11B2P19099 503 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 ASCL1P50553 236 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 TPD52P55327 224 aaPredicted RBP4.12□□□□□ -1.75
CCDC54-201ENST00000261058 RPS18P62269 152 aaKnown RBP4.12□□□□□ -1.75
CCDC54-201ENST00000261058 RBPJQ06330 500 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 ACSM1Q08AH1 577 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SYT14P1Q58G82 188 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 C19orf48Q6RUI8 117 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 TMPRSS11BQ86T26 416 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 ARHGAP24Q8N264 748 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 NPEPL1Q8NDH3 523 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 DMBX1Q8NFW5 382 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 GRHL3Q8TE85 626 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 HSD17B8Q92506 261 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SFXN2Q96NB2 322 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms