RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SLC30A4O14863 429 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 CBFA2T3O75081 653 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 CBSLP0DN79 551 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 CBSP35520 551 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 ETV4P43268 484 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 ATP6V0D1P61421 351 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 ACAP2Q15057 778 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 RPE65Q16518 533 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 ACSBG2Q5FVE4 666 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 CAPRIN2Q6IMN6 1127 aaKnown RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 C17orf82Q86X59 251 aaPredicted RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 ARL14Q8N4G2 192 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 SKA2Q8WVK7 121 aaPredicted RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 PDLIM5Q96HC4 596 aaKnown RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 SCYL1Q96KG9 808 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 INSM2Q96T92 566 aaPredicted RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 CDC6Q99741 560 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 MLXIPLQ9NP71 852 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 POT1Q9NUX5 634 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 TSR3Q9UJK0 312 aaKnown RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 HEBP2Q9Y5Z4 205 aa20.18■□□□□ 0.82
RTCA-201ENST00000260563 CFAP20Q9Y6A4 193 aaKnown RBP20.18■□□□□ 0.82
RTCA-201ENST00000260563 LY6G6EA0A0G2JKS1 128 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 EIF3FO00303 357 aaPredicted RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 PLIN3O60664 434 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 MTHFD1P11586 935 aaKnown RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 CKMT1AP12532 417 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 XRCC1P18887 633 aaPredicted RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 FASLGP48023 281 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 DUSP3P51452 185 aaPredicted RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 GYS2P54840 703 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 HHEXQ03014 270 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 ARMC2Q8NEN0 867 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 INTS9Q9NV88 658 aaKnown RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 ZNF624Q9P2J8 865 aaPredicted RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 CPNE7Q9UBL6 633 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 U3KQA8 63 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 VIPP01282 170 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 PROCP04070 461 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 MYF5P13349 255 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 ENO3P13929 434 aaPredicted RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 TFEBP19484 476 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 WDR4P57081 412 aaKnown RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 DUS1LQ6P1R4 473 aaKnown RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 MYO1HQ8N1T3 1032 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 CCDC63Q8NA47 563 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 DEFB124Q8NES8 71 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 OR6C4Q8NGE1 309 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 TFB2MQ9H5Q4 396 aaKnown RBP20.17■□□□□ 0.82
RTCA-201ENST00000260563 XPR1Q9UBH6 696 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 PADI4Q9UM07 663 aa20.17■□□□□ 0.82
RTCA-201ENST00000260563 ZBTB14O43829 449 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 RBP1P09455 135 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 GLB1P16278 677 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 SDHBP21912 280 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 ACADLP28330 430 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 SLC19A1P41440 591 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 UBE2IP63279 158 aaKnown RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 TECRLQ5HYJ1 363 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 HHATQ5VTY9 493 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 NEK10Q6ZWH5 1172 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 PIWIL4Q7Z3Z4 852 aaKnown RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 ISCA2Q86U28 154 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 TFGQ92734 400 aaPredicted RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 NAT6Q93015 286 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 PTERQ96BW5 349 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 FOPNLQ96NB1 174 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 PAIP2Q9BPZ3 127 aaKnown RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 MRPL57Q9BQC6 102 aaKnown RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 MRPL46Q9H2W6 279 aaKnown RBP20.16■□□□□ 0.82
RTCA-201ENST00000260563 ASF1AQ9Y294 204 aa20.16■□□□□ 0.82
RTCA-201ENST00000260563 RP1P56715 2156 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 EME2A4GXA9 379 aaPredicted RBP20.15■□□□□ 0.82
RTCA-201ENST00000260563 RHPN2P1A8MT19 583 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 TK2O00142 265 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 BTN3A1O00481 513 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 TNFSF14O43557 240 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 NUDT21O43809 227 aaKnown RBP20.15■□□□□ 0.82
RTCA-201ENST00000260563 DHRS4L1P0CG22 281 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 CKMT2P17540 419 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 CSRP1P21291 193 aaKnown RBP20.15■□□□□ 0.82
RTCA-201ENST00000260563 KRT33BQ14525 404 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 RSPO4Q2I0M5 234 aaPredicted RBP20.15■□□□□ 0.82
RTCA-201ENST00000260563 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.15■□□□□ 0.82
RTCA-201ENST00000260563 GUSBP11Q6P575 273 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 TMEM151AQ8N4L1 468 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 KIAA1191Q96A73 305 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 ALG9Q9H6U8 611 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 LRIT1Q9P2V4 623 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 IKZF3Q9UKT9 509 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 RNF215Q9Y6U7 377 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 COLEC10Q9Y6Z7 277 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 CFAP54Q96N23 3096 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 PCNX2A6NKB5 2137 aa20.15■□□□□ 0.82
RTCA-201ENST00000260563 ANKRD12Q6UB98 2062 aa20.14■□□□□ 0.82
RTCA-201ENST00000260563 CEP250Q9BV73 2442 aa20.14■□□□□ 0.81
RTCA-201ENST00000260563 CPED1A4D0V7 1026 aa20.14■□□□□ 0.81
RTCA-201ENST00000260563 NPEPPSL1A6NEC2 478 aa20.14■□□□□ 0.81
RTCA-201ENST00000260563 RPN2P04844 631 aa20.14■□□□□ 0.81
RTCA-201ENST00000260563 MPC1LP0DKB6 136 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms