RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CHDHQ8NE62 594 aaPredicted RBP14.92□□□□□ -0.02
DDX56-201ENST00000258772 BPIFB6Q8NFQ5 453 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 UBTD2Q8WUN7 234 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 USP7Q93009 1102 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 KAT8Q9H7Z6 458 aaKnown RBP14.92□□□□□ -0.02
DDX56-201ENST00000258772 SLC6A13Q9NSD5 602 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 DCAF13Q9NV06 445 aaKnown RBP14.92□□□□□ -0.02
DDX56-201ENST00000258772 TBCCD1Q9NVR7 557 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 DNMT3BQ9UBC3 853 aaKnown RBP14.92□□□□□ -0.02
DDX56-201ENST00000258772 AP3M1Q9Y2T2 418 aa14.92□□□□□ -0.02
DDX56-201ENST00000258772 TRBV5-3A0A0A0MS03 114 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 TBKBP1A7MCY6 615 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 AREL1O15033 823 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 CREG1O75629 220 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 CLDN7O95471 211 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 RETP07949 1114 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 BMP1P13497 986 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 EPB42P16452 691 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 CSKP41240 450 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 TM4SF4P48230 202 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 TPD52P55327 224 aaPredicted RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 KCNAB2Q13303 367 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 USP39Q53GS9 565 aaKnown RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 GTF2IRD2BQ6EKJ0 949 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 METTL2BQ6P1Q9 378 aaKnown RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 SPESP1Q6UW49 350 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 GPR149Q86SP6 731 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 GTF2IRD2Q86UP8 949 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 NPAS4Q8IUM7 802 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 SLC43A3Q8NBI5 491 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 ULK4Q96C45 1275 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 ALG14Q96F25 216 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 C1orf109Q9NX04 203 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 RNF186Q9NXI6 227 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 PDE10AQ9Y233 779 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 PCDHB14Q9Y5E9 798 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 SCN8AQ9UQD0 1980 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 TRBC1P01850 177 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 BCKDHAP12694 445 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 PHC1P78364 1004 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 PPP1R8Q12972 351 aaKnown RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 TMEM179BQ7Z7N9 219 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 ADHFE1Q8IWW8 467 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 CLHC1Q8NHS4 586 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 WFDC5Q8TCV5 224 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 GIPC3Q8TF64 312 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 RAB2BQ8WUD1 216 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 MTFMTQ96DP5 389 aaKnown RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 GPN2Q9H9Y4 310 aaPredicted RBP14.91□□□□□ -0.02
DDX56-201ENST00000258772 RDH14Q9HBH5 336 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 CRLS1Q9UJA2 301 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 PSME2Q9UL46 239 aa14.91□□□□□ -0.02
DDX56-201ENST00000258772 SMAD6O43541 496 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 STK16O75716 305 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 BPIP17213 487 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 PRKACGP22612 351 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 NRIP1P48552 1158 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 BMXP51813 675 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 PLA2G16P53816 162 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 C21orf59P57076 290 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 CD47Q08722 323 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 PLD1Q13393 1074 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 ARHGEF7Q14155 803 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 CHRNA6Q15825 494 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 TAF12Q16514 161 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 CDKN3Q16667 212 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 CTU2Q2VPK5 515 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 LYPLAL1Q5VWZ2 237 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 MBOAT1Q6ZNC8 495 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 RBM23Q86U06 439 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 CALHM3Q86XJ0 350 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 PLPP6Q8IY26 295 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 OR5K1Q8NHB7 308 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 NETO1Q8TDF5 533 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 SNRNP27Q8WVK2 155 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 PLEKHA8Q96JA3 519 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 MAGED4Q96JG8 741 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 CSF3RQ99062 836 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 LATS2Q9NRM7 1088 aa14.9□□□□□ -0.02
DDX56-201ENST00000258772 AFF4Q9UHB7 1163 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 TDRKHQ9Y2W6 561 aaKnown RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 NUP214P35658 2090 aaPredicted RBP14.9□□□□□ -0.02
DDX56-201ENST00000258772 GLYATL1P3A0A0U1RQE8 302 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 LOC100130705A0A1B0GUX0 176 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 A0A1W2PQ45 241 aaPredicted RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 A0A1W2PQY0 241 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ERN1O75460 977 aaKnown RBP14.89□□□□□ -0.03
DDX56-201ENST00000258772 BCL10O95999 233 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HTR1AP08908 422 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 TFPTP0C1Z6 253 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 HNF1BP35680 557 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 DCTP40126 519 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 GZMMP51124 257 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 GABARAPL2P60520 117 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 BCL2L1Q07817 233 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 LAIR2Q6ISS4 152 aa14.89□□□□□ -0.03
DDX56-201ENST00000258772 ZNF554Q86TJ5 538 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms