RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OTOL1A6NHN0 477 aaPredicted RBP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 KIAA0355O15063 1070 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 XYLBO75191 536 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 SLC22A3O75751 556 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 C1SP09871 688 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 MSH3P20585 1137 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 PPIGQ13427 754 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 TRIM25Q14258 630 aaKnown RBP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 GPR107Q5VW38 600 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 ZBTB49Q6ZSB9 765 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 DHFR2Q86XF0 187 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 MYOCQ99972 504 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 BCAP29Q9UHQ4 241 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 MYRFQ9Y2G1 1151 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 WDR87Q6ZQQ6 2873 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 SOCS2O14508 198 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 TAPBPO15533 448 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 B4GALNT1Q00973 533 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 SYTL3Q4VX76 610 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CRTC3Q6UUV7 619 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 Q6ZSR9 355 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 PARP8Q8N3A8 854 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 KLK6Q92876 244 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 SLCO4A1Q96BD0 722 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CEP295NLQ96MC4 621 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 HEPHQ9BQS7 1158 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 EBPLQ9BY08 206 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 SARDHQ9UL12 918 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 SLC8A2Q9UPR5 921 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 PCDHB1Q9Y5F3 818 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 NME4O00746 187 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 OR7A17O14581 309 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 EFCAB14O75071 495 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 ULK1O75385 1050 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 PBX2P40425 430 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 NSG1P42857 185 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CTBSQ01459 385 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CAMK1Q14012 370 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 DHCR24Q15392 516 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 TTLL9Q3SXZ7 439 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 GALNT7Q86SF2 657 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 NXPE3Q969Y0 559 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 MTERF1Q99551 399 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 HAUS8Q9BT25 410 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 THUMPD3Q9BV44 507 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CTSLP07711 333 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 OR56A5P0C7T3 313 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 EPB42P16452 691 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 ZNF23P17027 643 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 POLR2JP52435 117 aaKnown RBP14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 HMBOX1Q6NT76 420 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 ELMSAN1Q6PJG2 1045 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 CHSY3Q70JA7 882 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 TRAPPC5Q8IUR0 188 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 GIPC3Q8TF64 312 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 AURKBQ96GD4 344 aaPredicted RBP14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 FBXL20Q96IG2 436 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 ACAT2Q9BWD1 397 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 POPDC3Q9HBV1 291 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 RIC8BQ9NVN3 520 aa14.32□□□□□ -0.12
TRAFD1-201ENST00000257604 RNF103-CHMP3A0A140T963 221 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 B4GAT1O43505 415 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 COQ9O75208 318 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 TULP3O75386 442 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 STK16O75716 305 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 IMPDH2P12268 514 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 NFKBIAP25963 317 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 SPINT3P49223 89 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 NFKB2Q00653 900 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 PGS1Q32NB8 556 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 SELENOMQ8WWX9 145 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 THEGQ9P2T0 379 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 MOSPD1Q9UJG1 213 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 CFAP20Q9Y6A4 193 aaKnown RBP14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 A0A1W2PPW3 197 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 H3BNH8 94 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 LINC00271P0C7V0 271 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 IDO1P14902 403 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 IL12AP29459 219 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 MAPK8P45983 427 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 HSPA13P48723 471 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 CTSCP53634 463 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 CD300CQ08708 224 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 ZIK1Q3SY52 487 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 CCSMST1Q4G0I0 132 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 CPXM2Q8N436 756 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 AP2M1Q96CW1 435 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 LRRC58Q96CX6 371 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 RSPRY1Q96DX4 576 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 ZDHHC3Q9NYG2 299 aa14.31□□□□□ -0.12
TRAFD1-201ENST00000257604 LZTS3O60299 673 aaPredicted RBP14.3□□□□□ -0.12
TRAFD1-201ENST00000257604 SOCS5O75159 536 aa14.3□□□□□ -0.12
TRAFD1-201ENST00000257604 RSL1D1O76021 490 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms