RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HPS4Q9NQG7 708 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 NCF1BA6NI72 391 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 NCF1CA8MVU1 366 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 RFXAPO00287 272 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 STX16O14662 325 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 KCNH1O95259 989 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 PRAMEF12O95522 483 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 HPRP00739 348 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 RAP2AP10114 183 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 NCF1P14598 390 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 CDH3P22223 829 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 CDH18Q13634 790 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SELPLGQ14242 412 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 GALNT3Q14435 633 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SETMARQ53H47 684 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 EGFLAMQ63HQ2 1017 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 UGT3A1Q6NUS8 523 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 DPP10Q8N608 796 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 ITFG1Q8TB96 612 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SGCDQ92629 289 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 HDAC2Q92769 488 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SMIM14Q96QK8 99 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 ACOX2Q99424 681 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 ARMC7Q9H6L4 198 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 UBA2Q9UBT2 640 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 TMEM98Q9Y2Y6 226 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 MAGED1Q9Y5V3 778 aaPredicted RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 GRXCR2A6NFK2 248 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 ANXA6P08133 673 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 PTPN2P17706 415 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 CSKP41240 450 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 PLA2G16P53816 162 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 SLC7A9P82251 487 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 FAM98BQ52LJ0 330 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 IGFN1Q86VF2 1251 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 PROKR1Q8TCW9 393 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 NEURL2Q9BR09 285 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 HGH1Q9BTY7 390 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 TOR3AQ9H497 397 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 TRNAU1APQ9NX07 287 aaKnown RBP16.65■□□□□ 0.26
FOXA1-201ENST00000250448 TAS2R13Q9NYV9 303 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 MED16Q9Y2X0 877 aa16.65■□□□□ 0.26
FOXA1-201ENST00000250448 ILVBLA1L0T0 632 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 MLYCDO95822 493 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 PCNAP12004 261 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 FMO4P31512 558 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 MTPNP58546 118 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 ARF5P84085 180 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 PRKG2Q13237 762 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 C6orf136Q5SQH8 315 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 TMC5Q6UXY8 1006 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 APCDD1Q8J025 514 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 PPM1MQ96MI6 270 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 TMEM45AQ9NWC5 275 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 STOML2Q9UJZ1 356 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 RWDD3Q9Y3V2 267 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 K7ERQ8 282 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 KDELR3O43731 214 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 BMP1P13497 986 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 MTHFRP42898 656 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 GSTM4Q03013 218 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 CHRNB3Q05901 458 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 ITGADQ13349 1161 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 DLEU7Q6UYE1 221 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 PRR23BQ6ZRT6 265 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 CHST9Q7L1S5 443 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 CMTM8Q8IZV2 173 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 HJURPQ8NCD3 748 aaPredicted RBP16.64■□□□□ 0.25
FOXA1-201ENST00000250448 OR56A4Q8NGH8 313 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 BRSK1Q8TDC3 778 aa16.64■□□□□ 0.25
FOXA1-201ENST00000250448 POLR1EQ9GZS1 481 aaKnown RBP16.64■□□□□ 0.25
FOXA1-201ENST00000250448 KLK8O60259 260 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 TPD52P55327 224 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 UBE3AQ05086 875 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 TTC23Q5W5X9 447 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 TXNDC11Q6PKC3 985 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 GPRIN3Q6ZVF9 776 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 RDH12Q96NR8 316 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CINPQ9BW66 212 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 PBX4Q9BYU1 374 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 EPOPA6NHQ4 379 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 BTN3A1O00481 513 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 ADAM23O75077 832 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CD160O95971 181 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 GGT1P19440 569 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 GABARAPL2P60520 117 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 ATP6AP1LQ52LC2 224 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 ABHD11Q8NFV4 315 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms