RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 V9GYQ6 96 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 RANBP2P49792 3224 aaKnown RBP21.17■□□□□ 0.98
CLN6-201ENST00000249806 ARHGAP10A1A4S6 786 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 C8GP07360 202 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 NNMTP40261 264 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 NEK5Q6P3R8 708 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 TRPV3Q8NET8 790 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 ELMO1Q92556 727 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 ACPTQ9BZG2 426 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 VAPAQ9P0L0 249 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 SLC22A14Q9Y267 594 aa21.17■□□□□ 0.98
CLN6-201ENST00000249806 TMEM202A6NGA9 273 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 EIF3FO00303 357 aaPredicted RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 FASP25445 335 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 HTR1EP28566 365 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 PWP1Q13610 501 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 PPP4R4Q6NUP7 873 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 EPHX4Q8IUS5 362 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 ZNF557Q8N988 423 aaPredicted RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 GOLM1Q8NBJ4 401 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 TSC22D3Q99576 134 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 DPY30Q9C005 99 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 ATG10Q9H0Y0 220 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 SMOXQ9NWM0 555 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 IL36AQ9UHA7 158 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 UPK3BL1B0FP48 263 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 UPK3BL2E5RIL1 263 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 GFYI3L273 518 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 DFNA5O60443 496 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 MT-ND1P03886 318 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 FAM58BPP0C7Q3 252 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 FPGSQ05932 587 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 MAD2L1Q13257 205 aaPredicted RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 PPIGQ13427 754 aaKnown RBP eCLIP21.16■□□□□ 0.987e-7■□□□□ 9.4
CLN6-201ENST00000249806 DHCR24Q15392 516 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 TCEAL5Q5H9L2 206 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 CDKL4Q5MAI5 379 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 SPANXN4Q5MJ08 99 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 RNF165Q6ZSG1 346 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 SATL1Q86VE3 508 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 CHERPQ8IWX8 916 aaKnown RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 CBR4Q8N4T8 237 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 SLC13A3Q8WWT9 602 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 PRPF18Q99633 342 aaKnown RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 OSBPL11Q9BXB4 747 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 MUC13Q9H3R2 512 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 C1orf109Q9NX04 203 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 DUS2Q9NX74 493 aaKnown RBP21.16■□□□□ 0.98
CLN6-201ENST00000249806 MARK1Q9P0L2 795 aa21.16■□□□□ 0.98
CLN6-201ENST00000249806 GRXCR2A6NFK2 248 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 IFRD1O00458 451 aaPredicted RBP21.15■□□□□ 0.98
CLN6-201ENST00000249806 KIF1CO43896 1103 aaKnown RBP21.15■□□□□ 0.98
CLN6-201ENST00000249806 PRAMEF4O60810 478 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 XYLBO75191 536 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 ARHGEF15O94989 841 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 KRT6AP02538 564 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 KRT6BP04259 564 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 GPIP06744 558 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 ITPKAP23677 461 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 KRT6CP48668 564 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 PLEKHS1Q5SXH7 462 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 HENMT1Q5T8I9 393 aaKnown RBP21.15■□□□□ 0.98
CLN6-201ENST00000249806 CACHD1Q5VU97 1274 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 PRAMEF9Q5VWM5 478 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 GLYATQ6IB77 296 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 ITFG1Q8TB96 612 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 SELENOMQ8WWX9 145 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 GTF2H4Q92759 462 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 BIRC7Q96CA5 298 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 SEPHS2Q99611 448 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 CENPKQ9BS16 269 aa21.15■□□□□ 0.98
CLN6-201ENST00000249806 ENO4A6NNW6 628 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 KCNH1O95259 989 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 MPC1LP0DKB6 136 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 SLC6A12P48065 614 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 MESP2Q0VG99 397 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 USP39Q53GS9 565 aaKnown RBP21.14■□□□□ 0.98
CLN6-201ENST00000249806 RBM23Q86U06 439 aaKnown RBP21.14■□□□□ 0.98
CLN6-201ENST00000249806 C12orf40Q86WS4 652 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 ZBTB18Q99592 522 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 SLC29A3Q9BZD2 475 aa21.14■□□□□ 0.98
CLN6-201ENST00000249806 C16orf96A6NNT2 1141 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 TNFAIP8O95379 198 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 PGRP06401 933 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 BCKDHAP12694 445 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 NELFEP18615 380 aaKnown RBP21.14■□□□□ 0.97
CLN6-201ENST00000249806 CCT8P50990 548 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 GRIN2CQ14957 1233 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 FXNQ16595 210 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 MAPKAPK3Q16644 382 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 SMU1Q2TAY7 513 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 AASDHQ4L235 1098 aaPredicted RBP21.14■□□□□ 0.97
CLN6-201ENST00000249806 ZNF805Q5CZA5 627 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 NHSL2Q5HYW2 709 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 LRRC70Q7Z2Q7 622 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 DTWD1Q8N5C7 304 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 ST13P5Q8NFI4 369 aaPredicted RBP21.14■□□□□ 0.97
CLN6-201ENST00000249806 FOXJ1Q92949 421 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 ANAPC2Q9UJX6 822 aa21.14■□□□□ 0.97
CLN6-201ENST00000249806 ITM2BQ9Y287 266 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms