RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ZNF501Q96CX3 271 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 PANX3Q96QZ0 392 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 P2RY12Q9H244 342 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 XAB2Q9HCS7 855 aaKnown RBP20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 IL1RAPL1Q9NZN1 696 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 CIDEBQ9UHD4 219 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 CDYLQ9Y232 598 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 TMEM150CB9EJG8 249 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 CES2O00748 559 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 KDM1AO60341 852 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 CHRM5P08912 532 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 UGT2B7P16662 529 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 PAMP19021 973 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 TCN2P20062 427 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 F8A1P23610 371 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 AOAHP28039 575 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 FNTAP49354 379 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 ABRQ12979 859 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 PPP1R7Q15435 360 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 KIAA0930Q6ICG6 404 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 BORAQ6PGQ7 559 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 SPESP1Q6UW49 350 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 LRRC6Q86X45 466 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 CT55Q8WUE5 264 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 SKA2Q8WVK7 121 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 SERPINB12Q96P63 405 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 FCRL4Q96PJ5 515 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 PITPNM3Q9BZ71 974 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 LHX9Q9NQ69 397 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 KCND1Q9NSA2 647 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 TSR3Q9UJK0 312 aaKnown RBP20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 PADI1Q9ULC6 663 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 NEU2Q9Y3R4 380 aa20.47■□□□□ 0.87
HCFC1R1-201ENST00000248089 PFDN6O15212 129 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 CPNE3O75131 537 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 GPC4O75487 556 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 RPN2P04844 631 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 TPBGLP0DKB5 382 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 RPS3P23396 243 aaKnown RBP eCLIP20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 FMO4P31512 558 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 MC1RQ01726 317 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 DHX34Q14147 1143 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 CTSL3PQ5NE16 218 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 RNF187Q5TA31 235 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 ATP1A1-AS1Q5TC04 95 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 OTOAQ7RTW8 1153 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 MCUQ8NE86 351 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 OR8K5Q8NH50 307 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 FAM136AQ96C01 138 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 CATSPER2Q96P56 530 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 SPHK1Q9NYA1 384 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 ZNF462Q96JM2 2506 aa20.46■□□□□ 0.87
HCFC1R1-201ENST00000248089 SDR42E2A6NKP2 422 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 ISM1B1AKI9 464 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 MLNP12872 115 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 TCP1P17987 556 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 OAS2P29728 719 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 DNASE1L3Q13609 305 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 TYSND1Q2T9J0 566 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 PRAMEF17Q5VTA0 474 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 DCUN1D3Q8IWE4 304 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 LPGAT1Q92604 370 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 CAPZA3Q96KX2 299 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 DDX47Q9H0S4 455 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 OR6C2Q9NZP2 312 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 ASIC3Q9UHC3 531 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 CRYL1Q9Y2S2 319 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 MAD1L1Q9Y6D9 718 aa20.45■□□□□ 0.86
HCFC1R1-201ENST00000248089 FAM237BA0A1B0GVD1 139 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 KPNA5O15131 536 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 NIPSNAP2O75323 286 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 SLCO2B1O94956 709 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 OGNP20774 298 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 CYP2A7P20853 494 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 PKLRP30613 574 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 GNG11P61952 73 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 DEFB109BQ30KR1 87 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 ANKRD20A4Q4UJ75 823 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 ZNF470Q6ECI4 717 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 FAM199XQ6PEV8 388 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 UNC5DQ6UXZ4 953 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 TAX1BP1Q86VP1 789 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 PPIL6Q8IXY8 311 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 C2orf73Q8N5S3 287 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 OR1L3Q8NH93 324 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 N4BP2L2Q92802 583 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 PDLIM2Q96JY6 352 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 OR2A14Q96R47 310 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 SYTL2Q9HCH5 934 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 LATS2Q9NRM7 1088 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 KCND3Q9UK17 655 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 RUVBL2Q9Y230 463 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 PCDHB3Q9Y5E6 796 aa20.44■□□□□ 0.86
HCFC1R1-201ENST00000248089 A0A0J9YY10 115 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 F7P08709 466 aaPredicted RBP20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 CCR10P46092 362 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 RAB28P51157 221 aa20.43■□□□□ 0.86
HCFC1R1-201ENST00000248089 POLE2P56282 527 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms