RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 OPTCQ9UBM4 332 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ABCG2Q9UNQ0 655 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TNFRSF10BO14763 440 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 RPL9P32969 192 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 S100A3P33764 101 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TRPC1P48995 793 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 CYP4Z1Q86W10 505 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ADAMTS16Q8TE57 1224 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 PROX1Q92786 737 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 PPP1R14BQ96C90 147 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 REXO5Q96IC2 774 aaKnown RBP16.53■□□□□ 0.24
SGPP1-201ENST00000247225 OSBPL10Q9BXB5 764 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ASB8Q9H765 288 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TMEM248Q9NWD8 314 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 TMEM9Q9P0T7 183 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 SLCO3A1Q9UIG8 710 aa16.53■□□□□ 0.24
SGPP1-201ENST00000247225 UGT2B4P06133 528 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 RHOCP08134 193 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 ST13P50502 369 aaKnown RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 FOXM1Q08050 763 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 GTF2IRD2BQ6EKJ0 949 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 GTF2IRD2Q86UP8 949 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 PTRH1Q86Y79 214 aaKnown RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 CARNMT1Q8N4J0 409 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 HDAC2Q92769 488 aaKnown RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 ZBTB20Q9HC78 741 aaPredicted RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 SLC25A37Q9NYZ2 338 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 TMA7Q9Y2S6 64 aaKnown RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 GIT1Q9Y2X7 761 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 A0A096LPI6 279 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 PFDN6O15212 129 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 TACR1P25103 407 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 C21orf33P30042 268 aaPredicted RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 HSPA14Q0VDF9 509 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 RNF219Q5W0B1 726 aaPredicted RBP16.52■□□□□ 0.24
SGPP1-201ENST00000247225 SLC16A12Q6ZSM3 486 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 SPATC1Q76KD6 591 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 P3H2Q8IVL5 708 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 PDPRQ8NCN5 879 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 PIK3C3Q8NEB9 887 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 SELENOMQ8WWX9 145 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 KCNC2Q96PR1 638 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 BBS2Q9BXC9 721 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 LRTM1Q9HBL6 345 aa16.52■□□□□ 0.24
SGPP1-201ENST00000247225 LSM1O15116 133 aaKnown RBP16.52■□□□□ 0.23
SGPP1-201ENST00000247225 AQP9O43315 295 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 TULP3O75386 442 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 OPN1SWP03999 348 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 ITPKAP23677 461 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 POU1F1P28069 291 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 CDKN2CP42773 168 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 GRB14Q14449 540 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 KCNJ8Q15842 424 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 CARD16Q5EG05 197 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 RBM48Q5RL73 367 aaKnown RBP16.52■□□□□ 0.23
SGPP1-201ENST00000247225 OR4F3Q6IEY1 312 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 PDE12Q6L8Q7 609 aaKnown RBP16.52■□□□□ 0.23
SGPP1-201ENST00000247225 SUSD1Q6UWL2 747 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 GTF2H4Q92759 462 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 DOK1Q99704 481 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 ATG10Q9H0Y0 220 aa16.52■□□□□ 0.23
SGPP1-201ENST00000247225 EXOSC4Q9NPD3 245 aaKnown RBP16.52■□□□□ 0.23
SGPP1-201ENST00000247225 TRMT13Q9NUP7 481 aaKnown RBP16.52■□□□□ 0.23
SGPP1-201ENST00000247225 K7ERQ8 282 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 INSIG1O15503 277 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 COQ9O75208 318 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 CPNE6O95741 557 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 MSH3P20585 1137 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 NADSYN1Q6IA69 706 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 EFL1Q7Z2Z2 1120 aaKnown RBP16.51■□□□□ 0.23
SGPP1-201ENST00000247225 PTPN18Q99952 460 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 GPRC5BQ9NZH0 403 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 SBF1O95248 1867 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 OR7A17O14581 309 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 CYP11A1P05108 521 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 TCEA1P23193 301 aaKnown RBP16.51■□□□□ 0.23
SGPP1-201ENST00000247225 CA8P35219 290 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 SLC26A3P40879 764 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 GNPDA1P46926 289 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 SERPINB10P48595 397 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
SGPP1-201ENST00000247225 SF3B4Q15427 424 aaKnown RBP eCLIP16.51■□□□□ 0.23
SGPP1-201ENST00000247225 UBE2J2Q8N2K1 259 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 TTC29Q8NA56 475 aaPredicted RBP16.51■□□□□ 0.23
SGPP1-201ENST00000247225 LEMD2Q8NC56 503 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 LKAAEAR1Q8TD35 194 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 ENPP5Q9UJA9 477 aa16.51■□□□□ 0.23
SGPP1-201ENST00000247225 RGS5O15539 181 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 PRAMEF11O60813 436 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 GJB5O95377 273 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 SLC6A4P31645 630 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 GATMP50440 423 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 SGSHP51688 502 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 RPS3AP61247 264 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms