RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CACHD1Q5VU97 1274 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 TRIM46Q7Z4K8 759 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-202ENST00000244303 DNAJB7Q7Z6W7 309 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-202ENST00000244303 ZDHHC13Q8IUH4 622 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 CLHC1Q8NHS4 586 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 PNPT1Q8TCS8 783 aaKnown RBP14.08□□□□□ -0.16
HIF3A-202ENST00000244303 MTFMTQ96DP5 389 aaKnown RBP14.08□□□□□ -0.16
HIF3A-202ENST00000244303 SLC47A1Q96FL8 570 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 NTMT1Q9BV86 223 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 CLMPQ9H6B4 373 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 SMURF2Q9HAU4 748 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 LRTM1Q9HBL6 345 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 LATS2Q9NRM7 1088 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 TRPS1Q9UHF7 1281 aa14.08□□□□□ -0.16
HIF3A-202ENST00000244303 ELOVL7A1L3X0 281 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 MANBAO00462 879 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 CPNE6O95741 557 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 IL6P05231 212 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 EBLN1P0CF75 366 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 CDKN3Q16667 212 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 SMU1Q2TAY7 513 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 CNKSR3Q6P9H4 555 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ZNF773Q6PK81 442 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 PHACTR4Q8IZ21 702 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ADGRG2Q8IZP9 1017 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 HS3ST5Q8IZT8 346 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 GLB1L3Q8NCI6 653 aaPredicted RBP14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 UBTD2Q8WUN7 234 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 FAM162AQ96A26 154 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ULK4Q96C45 1275 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 VWCEQ96DN2 955 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ZNF558Q96NG5 402 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 TOR3AQ9H497 397 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 LTB4R2Q9NPC1 389 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 DNAJB9Q9UBS3 223 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ZNHIT2Q9UHR6 403 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 CXCR6O00574 342 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 PRRG1O14668 218 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 NOBOXO60393 691 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 GREM1O60565 184 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 WDR47O94967 919 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 HPRP00739 348 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 CCL5P13501 91 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 EPB42P16452 691 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 SEMG2Q02383 582 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 RAB33AQ14088 237 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ARHGEF7Q14155 803 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 USP39Q53GS9 565 aaKnown RBP14.07□□□□□ -0.16
HIF3A-202ENST00000244303 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 FGD3Q5JSP0 725 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 ELMSAN1Q6PJG2 1045 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 MACC1Q6ZN28 852 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 RNF165Q6ZSG1 346 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 SDCCAG3Q96C92 435 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 OR52E6Q96RD3 313 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 HTATIP2Q9BUP3 242 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 SLC6A13Q9NSD5 602 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 INVSQ9Y283 1065 aa14.07□□□□□ -0.16
HIF3A-202ENST00000244303 AREL1O15033 823 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 ATP6V1G1O75348 118 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 SPAM1P38567 509 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 PPP3CCP48454 512 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 ANKRD34AQ69YU3 496 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 THAP5Q7Z6K1 395 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 TSPAN33Q86UF1 283 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 GALNT13Q8IUC8 556 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 ARL14EPQ8N8R7 260 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-202ENST00000244303 TERB1Q8NA31 727 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 SMYD1Q8NB12 490 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 AUTS2Q8WXX7 1259 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 USP7Q93009 1102 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 THAP11Q96EK4 314 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 HERC2P3Q9BVR0 1158 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 TNKS2Q9H2K2 1166 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 ADNPQ9H2P0 1102 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 ACTR8Q9H981 624 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 FANCEQ9HB96 536 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 COL4A6Q14031 1691 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.06□□□□□ -0.16
HIF3A-202ENST00000244303 SH3PXD2BA1X283 911 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 GFRA2O00451 464 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 GNGT2O14610 69 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 STK16O75716 305 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 PRKD3O94806 890 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 LATS1O95835 1130 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 BCKDHAP12694 445 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 IL7RP16871 459 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 CD247P20963 164 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 MATN1P21941 496 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 MAPK10P53779 464 aa14.06□□□□□ -0.16
HIF3A-202ENST00000244303 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
HIF3A-202ENST00000244303 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms