RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 LILRA2Q8N149 483 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 LILRA3Q8N6C8 439 aaPredicted RBP18.05■□□□□ 0.48
HOXC11-201ENST00000243082 CCM2Q9BSQ5 444 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 PLA2G2FQ9BZM2 168 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 ACTR8Q9H981 624 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 FAM8A1Q9UBU6 413 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 RIMS3Q9UJD0 308 aa18.05■□□□□ 0.48
HOXC11-201ENST00000243082 LEF1Q9UJU2 399 aaPredicted RBP18.05■□□□□ 0.48
HOXC11-201ENST00000243082 KIF26AQ9ULI4 1882 aaPredicted RBP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 KCNE1BA0A087WTH5 132 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 SLC5A10A0PJK1 596 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 RSL1D1O76021 490 aaKnown RBP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 GSTM1P09488 218 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 GJA4P35212 333 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 IL12RB1P42701 662 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 RPL38P63173 70 aaKnown RBP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 RHDQ02161 417 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 GSTM4Q03013 218 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 ABRQ12979 859 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 RUNX3Q13761 415 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 CPSF6Q16630 551 aaKnown RBP eCLIP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 AAK1Q2M2I8 961 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 SGO1Q5FBB7 561 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 HABP4Q5JVS0 413 aaKnown RBP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 SYCE2Q6PIF2 218 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM220Q6QAJ8 160 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 NUDT8Q8WV74 236 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 VCX3BQ9H321 246 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 COPS7BQ9H9Q2 264 aaPredicted RBP18.04■□□□□ 0.48
HOXC11-201ENST00000243082 ZDHHC4Q9NPG8 344 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 SLAMF8Q9P0V8 285 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 CDH7Q9ULB5 785 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 KIAA1549LQ6ZVL6 1849 aa18.04■□□□□ 0.48
HOXC11-201ENST00000243082 LRRK1Q38SD2 2015 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 TCRBV3S1A0A5B6 114 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PABPN1LA6NDY0 278 aaKnown RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 ARHGEF33A8MVX0 844 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 K7ESM1 405 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PEX1O43933 1283 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PRAMEF4O60810 478 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PSIP1O75475 530 aaKnown RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 C6P13671 934 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 HSD17B1P14061 328 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PREPP48147 710 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 MAP7D1Q3KQU3 841 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 GGTA1PQ4G0N0 100 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 ZNF658BQ4V348 819 aaPredicted RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 SLC44A4Q53GD3 710 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PRAMEF9Q5VWM5 478 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PPP2R2DQ66LE6 453 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 HOMEZQ8IX15 550 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 GLMNQ92990 594 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM125Q96AQ2 219 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 FBXL8Q96CD0 374 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 MTFMTQ96DP5 389 aaKnown RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 CHFRQ96EP1 664 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 SLC22A14Q9Y267 594 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 RFXAPO00287 272 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 LINC01565O15544 149 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 MMP20O60882 483 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 JAK1P23458 1154 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 GNPDA1P46926 289 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PFN3P60673 137 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 ADGRE1Q14246 886 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 GRM2Q14416 872 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 SYTL3Q4VX76 610 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 CYP2R1Q6VVX0 501 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 ZNF765Q7L2R6 523 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 MMAAQ8IVH4 418 aaKnown RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 CPA6Q8N4T0 437 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 L3MBTL4Q8NA19 623 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 DNAJB14Q8TBM8 379 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM159Q96B96 161 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 NUS1Q96E22 293 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PPP1R16AQ96I34 528 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 PKP2Q99959 881 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 TRIM8Q9BZR9 551 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 ATG10Q9H0Y0 220 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 EPHX3Q9H6B9 360 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 THAP10Q9P2Z0 257 aaPredicted RBP18.03■□□□□ 0.48
HOXC11-201ENST00000243082 GULP1Q9UBP9 304 aa18.03■□□□□ 0.48
HOXC11-201ENST00000243082 DYTNA2CJ06 578 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 RNASEH2AO75792 299 aaKnown RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 PDYNP01213 254 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 KRT6AP02538 564 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 KRT6BP04259 564 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 ITPKAP23677 461 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 KRT6CP48668 564 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 CLNS1AP54105 237 aaKnown RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 MAD2L1Q13257 205 aaPredicted RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 KIAA0040Q15053 153 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM52BQ4KMG9 183 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 ERN2Q76MJ5 926 aaKnown RBP18.02■□□□□ 0.48
HOXC11-201ENST00000243082 TRIM74Q86UV6 250 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 DHFR2Q86XF0 187 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 TMEM126BQ8IUX1 230 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 KIAA2013Q8IYS2 634 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 DPP10Q8N608 796 aa18.02■□□□□ 0.48
HOXC11-201ENST00000243082 UCMAQ8WVF2 138 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms