RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CATP04040 527 aaKnown RBP22.71■■□□□ 1.23
MSX2-201ENST00000239243 PSMC3P17980 439 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 GNPDA1P46926 289 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 NFYCQ13952 458 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 BCL7AQ4VC05 210 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 FAM46CQ5VWP2 391 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 TMEM220Q6QAJ8 160 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 IZUMO2Q6UXV1 221 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 FOPNLQ96NB1 174 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 SLC39A3Q9BRY0 314 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 HDAC8Q9BY41 377 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 ASIC5Q9NY37 505 aa22.71■■□□□ 1.23
MSX2-201ENST00000239243 SLC5A10A0PJK1 596 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 EPOPA6NHQ4 379 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 FXYD1O00168 92 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 EPHX1P07099 455 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 G6PDP11413 515 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 SLC2A4P14672 509 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 EPORP19235 508 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 JAK1P23458 1154 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 IL12RB1P42701 662 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 GPR1P46091 355 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 CCR3P51677 355 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 RFTN2Q52LD8 501 aaPredicted RBP22.7■■□□□ 1.23
MSX2-201ENST00000239243 SYCE2Q6PIF2 218 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 ST13P5Q8NFI4 369 aaPredicted RBP22.7■■□□□ 1.23
MSX2-201ENST00000239243 KLHL4Q9C0H6 718 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 IL1RL2Q9HB29 575 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 COQ6Q9Y2Z9 468 aa22.7■■□□□ 1.23
MSX2-201ENST00000239243 POLR3HQ9Y535 204 aaPredicted RBP22.7■■□□□ 1.23
MSX2-201ENST00000239243 DENND4AQ7Z401 1863 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 KAT7O95251 611 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 GRIA2P42262 883 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 RPL38P63173 70 aaKnown RBP22.7■■□□□ 1.22
MSX2-201ENST00000239243 CACHD1Q5VU97 1274 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 RAET1GQ6H3X3 334 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 PRR23BQ6ZRT6 265 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 MMAAQ8IVH4 418 aaKnown RBP22.7■■□□□ 1.22
MSX2-201ENST00000239243 L3MBTL4Q8NA19 623 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 VPS33AQ96AX1 596 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 ZNF514Q96K75 400 aaPredicted RBP22.7■■□□□ 1.22
MSX2-201ENST00000239243 ECSITQ9BQ95 431 aa22.7■■□□□ 1.22
MSX2-201ENST00000239243 CNOT6Q9ULM6 557 aaKnown RBP22.7■■□□□ 1.22
MSX2-201ENST00000239243 C15orf38-AP3S2A0A0A6YYH1 394 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SOD1P00441 154 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 C8BP07358 591 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 HSD17B1P14061 328 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 PCSK2P16519 638 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 BNIP2Q12982 314 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 GRM2Q14416 872 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 TRIP10Q15642 601 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 ATAT1Q5SQI0 421 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 ARPINQ7Z6K5 226 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SFTPA1Q8IWL2 248 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SLC15A3Q8IY34 581 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SLC22A15Q8IZD6 547 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 CXorf40AQ8TE69 158 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 ELSPBP1Q96BH3 223 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 LRGUKQ96M69 825 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 CCDC138Q96M89 665 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 ZBTB18Q99592 522 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 PCDHAC1Q9H158 963 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 LRTM1Q9HBL6 345 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 PRSS16Q9NQE7 514 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 TMEM202A6NGA9 273 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 NME4O00746 187 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 LIN7AO14910 233 aaPredicted RBP22.69■■□□□ 1.22
MSX2-201ENST00000239243 PEX1O43933 1283 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SLC6A2P23975 617 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 RHDQ02161 417 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 GTF2H3Q13889 308 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 CPSF6Q16630 551 aaKnown RBP eCLIP22.69■■□□□ 1.22
MSX2-201ENST00000239243 TIGD2Q4W5G0 525 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 KBTBD2Q8IY47 623 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 TRIM15Q9C019 465 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 ELOVL6Q9H5J4 265 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 FAM8A1Q9UBU6 413 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 SLC22A14Q9Y267 594 aa22.69■■□□□ 1.22
MSX2-201ENST00000239243 UGDHO60701 494 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 MMP20O60882 483 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 APODP05090 189 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 ABRQ12979 859 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 TLR1Q15399 786 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 ZXDCQ2QGD7 858 aaPredicted RBP22.68■■□□□ 1.22
MSX2-201ENST00000239243 DHFR2Q86XF0 187 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 RGL4Q8IZJ4 473 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 DPP10Q8N608 796 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 GLB1L3Q8NCI6 653 aaPredicted RBP22.68■■□□□ 1.22
MSX2-201ENST00000239243 FARSBQ9NSD9 589 aaKnown RBP22.68■■□□□ 1.22
MSX2-201ENST00000239243 C1orf109Q9NX04 203 aa22.68■■□□□ 1.22
MSX2-201ENST00000239243 ASPDHA6ND91 283 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ARHGEF33A8MVX0 844 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ANKRD28O15084 1053 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 IL12AP29459 219 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 ATXN3P54252 364 aaPredicted RBP22.67■■□□□ 1.22
MSX2-201ENST00000239243 ZNF33BQ06732 778 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 HYAL1Q12794 435 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 NAIF1Q69YI7 327 aaPredicted RBP22.67■■□□□ 1.22
MSX2-201ENST00000239243 NEK5Q6P3R8 708 aa22.67■■□□□ 1.22
MSX2-201ENST00000239243 FAM9CQ8IZT9 166 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms