RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 OR14C36Q8NHC7 312 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 LRRC3Q9BY71 257 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 MAGEE1Q9HCI5 957 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 A0A0G2JN53 185 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 A8MT66 165 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 BTBD19C9JJ37 291 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 MATN2O00339 956 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 SLC22A2O15244 555 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 C8GP07360 202 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 RORCP51449 518 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 DAG1Q14118 895 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 SLC2A7Q6PXP3 512 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 OR5AK3PQ8NH89 298 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 TMBIM1Q969X1 311 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 TFB2MQ9H5Q4 396 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 RIMKLBQ9ULI2 386 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 USP2O75604 605 aaPredicted RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 TBX18O95935 607 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ERVK-8P63133 956 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 SYT16Q17RD7 645 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 RFKQ969G6 155 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 A0A0X1KG70 313 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 OPN1SWP03999 348 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 IDSP22304 550 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 CMPK1P30085 196 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 AVPR1BP47901 424 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 DGKQP52824 942 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 LBX2Q6XYB7 198 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 BEND7Q8N7W2 519 aaPredicted RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 OR10Q1Q8NGQ4 319 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 IGKV6D-41A0A0C4DH26 115 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 PDPK1O15530 556 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 PAPSS2O95340 614 aaPredicted RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 CYP11A1P05108 521 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 S100A6P06703 90 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 DGKEP52429 567 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 STXBP1P61764 594 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 OR10G2Q8NGC3 310 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 PMEPA1Q969W9 287 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 MFSD1Q9H3U5 465 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 DNAAF2Q9NVR5 837 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 CPQQ9Y646 472 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 ALPIP09923 528 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 TEAD4Q15561 434 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 CLEC20AQ6ZU45 233 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 GALNT13Q8IUC8 556 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 FATE1Q969F0 183 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 RSL1D1O76021 490 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 GNALP38405 381 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 SLC10A7Q0GE19 358 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 CLEC12AQ5QGZ9 265 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 PCDHGA3Q9Y5H0 932 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 RBMXL2O75526 392 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 CLPXO76031 633 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 SCGNO76038 276 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 VIPP01282 170 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 S100GP29377 79 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 CSKP41240 450 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 CLCN4P51793 760 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 SFT2D3Q587I9 215 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 POLR2J2Q9GZM3 115 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 MRTO4Q9UKD2 239 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 GABRDO14764 452 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 TSPAN4O14817 238 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 FESP07332 822 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 OGDHQ02218 1023 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 RBM48Q5RL73 367 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 KIAA1161Q6NSJ0 714 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 RANBP3LQ86VV4 465 aaPredicted RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
NEK4-201ENST00000233027 C7orf57Q8NEG2 295 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 OR2L5Q8NG80 312 aa13.13□□□□□ -0.31
NEK4-201ENST00000233027 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms