RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 C1QTNF8P60827 252 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TSPAN5P62079 268 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 HNRNPDQ14103 355 aaKnown RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 LINGO2Q7L985 606 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 HID1Q8IV36 788 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ZBED6CLQ96FA7 236 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 COPS4Q9BT78 406 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ST6GALNAC4Q9H4F1 302 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TCF7L1Q9HCS4 588 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 RGS17Q9UGC6 210 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PRAMEF33A0A0G2JMD5 474 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 SAP18O00422 153 aaKnown RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 KMOO15229 486 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 SLC31A1O15431 190 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 SLC7A4O43246 635 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PRAMEF10O60809 474 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 REM1O75628 298 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 SMPD1P17405 629 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 NCBP2P52298 156 aaKnown RBP eCLIP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TARDBPQ13148 414 aaKnown RBP eCLIP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ABCB8Q9NUT2 735 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 FKBP7Q9Y680 259 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CCDC85CA6NKD9 419 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 GSTT2BP0CG30 244 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PITPNAQ00169 270 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PPIGQ13427 754 aaKnown RBP eCLIP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CRTC2Q53ET0 693 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 LRRC73Q5JTD7 316 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 MPP5Q8N3R9 675 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ESAMQ96AP7 390 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 GRHL1Q9NZI5 618 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 VLDLRP98155 873 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 LIN52Q52LA3 116 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 KLHL22Q53GT1 634 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 GPALPP1Q8IXQ4 340 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 BANPQ8N9N5 519 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 GPR151Q8TDV0 419 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TTYH3Q9C0H2 523 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 AJAP1Q9UKB5 411 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 OR14I1A6ND48 311 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 SEMA3DO95025 777 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 RENP00797 406 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 RAP2AP10114 183 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 GNAZP19086 355 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TBC1D25Q3MII6 688 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CCSAPQ6IQ19 270 aaPredicted RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 TMEM214Q6NUQ4 689 aaKnown RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 FRMD7Q6ZUT3 714 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 USP43Q70EL4 1123 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 HDDC3Q8N4P3 179 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 LGR4Q9BXB1 951 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 FARSBQ9NSD9 589 aaKnown RBP11.35□□□□□ -0.59
LAMA4-201ENST00000230538 IGSF9Q9P2J2 1179 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PRAMEF12O95522 483 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 APOC1P02654 83 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 CLCN4P51793 760 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 FOXM1Q08050 763 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 PRSS58Q8IYP2 241 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 ARMC10Q8N2F6 343 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 OR8H1Q8NGG4 311 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 RIPOR3Q96MK2 946 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 IL12RB2Q99665 862 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 COQ10BQ9H8M1 238 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
LAMA4-201ENST00000230538 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 FAM234BA2RU67 622 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CCKBRP32239 447 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ADGRE1Q14246 886 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PUM1Q14671 1186 aaKnown RBP eCLIP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 OGFOD2Q6N063 350 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 SAMD14Q8IZD0 417 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 OR2AG1Q9H205 316 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CXorf21Q9HAI6 301 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PRORSD1PA6NEY8 169 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 GNB5O14775 395 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 MID1O15344 667 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 USP2O75604 605 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 KLF1Q13351 362 aaPredicted RBP11.34□□□□□ -0.59
LAMA4-201ENST00000230538 NUS1Q96E22 293 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 RAB11FIP5Q9BXF6 653 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 PI15O43692 258 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 EOMESO95936 686 aa11.34□□□□□ -0.59
LAMA4-201ENST00000230538 CREB1P16220 341 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms