RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 UFM1P61960 85 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 SLC13A2Q13183 592 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF730Q6ZMV8 503 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 SLC39A8Q9C0K1 460 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 POLR3BQ9NW08 1133 aaPredicted RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 IGKV6D-41A0A0C4DH26 115 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 HPRP00739 348 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 HTR7P34969 479 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 HTR2BP41595 481 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 MAP2K4P45985 399 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ADNP2Q6IQ32 1131 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ARMC6Q6NXE6 501 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 PYURFQ96I23 114 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 SMPD4Q9NXE4 827 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 CHD2O14647 1828 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 GABRDO14764 452 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 CCNDBP1O95273 360 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 OGNP20774 298 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 MAGEA2P43356 314 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 INHBEP58166 350 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 SRSF11Q05519 484 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ABRQ12979 859 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 KIAA1614Q5VZ46 1190 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 HMBOX1Q6NT76 420 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 STX12Q86Y82 276 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 STX16O14662 325 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 XYLBO75191 536 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 NPPAP01160 153 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 DGKQP52824 942 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF433Q8N7K0 673 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 CCDC115Q96NT0 180 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 COPS8Q99627 209 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 HNRNPABQ99729 332 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ADAM2Q99965 735 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SLC7A5P2Q9GIP4 190 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 DPAGT1Q9H3H5 408 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 BRD9Q9H8M2 597 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SDHDO14521 159 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 CDRT1O95170 752 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ALDOAP04075 364 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MNDAP41218 407 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 DSC3Q14574 896 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SWI5Q1ZZU3 235 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 RFTN2Q52LD8 501 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 FAM171A1Q5VUB5 890 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SYVN1Q86TM6 617 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ZBTB2Q8N680 514 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 NFKBIZQ9BYH8 718 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ANXA4P09525 319 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MAPK8P45983 427 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 RPS3AP61247 264 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ACOX1Q15067 660 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 LMO3Q8TAP4 145 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 C14orf119Q9NWQ9 140 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 NME6O75414 186 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 OR2B3O76000 313 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 OPRL1P41146 370 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 HNRNPFP52597 415 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 DNAJB13P59910 316 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 LGI4Q8N135 537 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 KCTD5Q9NXV2 234 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 A0A0X1KG70 313 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MTRF1O75570 445 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 CRYZL1O95825 349 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 PTTG1O95997 202 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 BMXP51813 675 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 RPA4Q13156 261 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF697Q5TEC3 545 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SLC25A24Q6NUK1 477 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 SIDT2Q8NBJ9 832 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 CNIH3Q8TBE1 160 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 ZC3H10Q96K80 434 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 BARD1Q99728 777 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MIOSQ9NXC5 875 aa13.55□□□□□ -0.24
HCFC2-201ENST00000229330 MAB21L2Q9Y586 359 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms