RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 ZFP69Q49AA0 526 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 C6orf141Q5SZD1 244 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 LRRTM3Q86VH5 581 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 DBF4BQ8NFT6 615 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 KHSRPQ92945 711 aaKnown RBP eCLIP13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 MAGEH1Q9H213 219 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 SACM1LQ9NTJ5 587 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 NUDT4Q9NZJ9 180 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
NFKB1-201ENST00000226574 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SH3PXD2BA1X283 911 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 KRT87PA6NCN2 255 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 EDNRBP24530 442 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 BMXP51813 675 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PTSQ03393 145 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SLC24A5Q71RS6 500 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 OR5K1Q8NHB7 308 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SERHL2Q9H4I8 314 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SERHLQ9NQF3 203 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ERVK-18Q9QC07 812 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 TLR6Q9Y2C9 796 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 WBP4O75554 376 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 INMTO95050 263 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ATE1O95260 518 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 POLR2IP36954 125 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ELP6Q0PNE2 266 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 DSC3Q14574 896 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SLC22A15Q8IZD6 547 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 DEPDC4Q8N2C3 294 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 TTC9BQ8N6N2 239 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 NUDT8Q8WV74 236 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 GAB3Q8WWW8 586 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ARMC5Q96C12 935 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 F5P12259 2224 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 A0A1B0GVM2 712 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ZBTB42B2RXF5 422 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ABCB7O75027 752 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PTNP21246 168 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 AGXTP21549 392 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 LEPRP48357 1165 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 ACADVLP49748 655 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 BCAP31P51572 246 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 NCS1P62166 190 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PTPRRQ15256 657 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 CHRNA6Q15825 494 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 TMEM199Q8N511 208 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 METTL25Q8N6Q8 603 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PACRGLQ8N7B6 248 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
NFKB1-201ENST00000226574 PTPN18Q99952 460 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
NFKB1-201ENST00000226574 SNTNA6NMZ2 147 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 VILLO15195 856 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 RAET1GQ6H3X3 334 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 PLET1Q6UQ28 207 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 AGMOQ6ZNB7 445 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 SLC2A13Q96QE2 648 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 PKP4Q99569 1192 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 DPH2Q9BQC3 489 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 PTGFRNQ9P2B2 879 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 FZD9O00144 591 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 DNAJB13P59910 316 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 POLR2LP62875 67 aaKnown RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 GPAT3Q53EU6 434 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 KLHL12Q53G59 568 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 CERS6Q6ZMG9 384 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 CCDC80Q76M96 950 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 CYP2U1Q7Z449 544 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 CACTIN-AS1Q8N1I8 211 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 AUTS2Q8WXX7 1259 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 NUSAP1Q9BXS6 441 aaKnown RBP13.46□□□□□ -0.25
NFKB1-201ENST00000226574 MEAF6Q9HAF1 191 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
NFKB1-201ENST00000226574 SSR3Q9UNL2 185 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms