RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ZDHHC24Q6UX98 284 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 PRSS42Q7Z5A4 293 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 AMIGO1Q86WK6 493 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ADGRF3Q8IZF5 1079 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ZBTB2Q8N680 514 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 SIDT2Q8NBJ9 832 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 NOA1Q8NC60 698 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 GIMAP7Q8NHV1 300 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 KIF18AQ8NI77 898 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 HNRNPLLQ8WVV9 542 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 TAAR9Q96RI9 348 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 NDNQ99608 321 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 CCDC68Q9H2F9 335 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ZNF768Q9H5H4 540 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 APMAPQ9HDC9 416 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 PCDHGA7Q9Y5G6 932 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 CELSR3Q9NYQ7 3312 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
LSM5-201ENST00000223084 SNRNP200O75643 2136 aaKnown RBP12.31□□□□□ -0.44
LSM5-201ENST00000223084 B4E171 279 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 AHSGP02765 367 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 TSPAN7P41732 249 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 MC2RQ01718 297 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 FOXM1Q08050 763 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 CUL1Q13616 776 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 GBX1Q14549 363 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 KCNAB1Q14722 419 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 CCSMST1Q4G0I0 132 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 RBM20Q5T481 1227 aaKnown RBP12.3□□□□□ -0.44
LSM5-201ENST00000223084 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 MMGT1Q8N4V1 131 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 C2orf73Q8N5S3 287 aaPredicted RBP12.3□□□□□ -0.44
LSM5-201ENST00000223084 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 KLHL6Q8WZ60 621 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 IL17FQ96PD4 163 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 GPR21Q99679 349 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 AARSD1Q9BTE6 412 aaKnown RBP12.3□□□□□ -0.44
LSM5-201ENST00000223084 KLHL25Q9H0H3 589 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 LATS2Q9NRM7 1088 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 SIDT1Q9NXL6 827 aaKnown RBP12.3□□□□□ -0.44
LSM5-201ENST00000223084 SPHK1Q9NYA1 384 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 POLG2Q9UHN1 485 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 POMT2Q9UKY4 750 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 ZFYVE26Q68DK2 2539 aa12.3□□□□□ -0.44
LSM5-201ENST00000223084 A0A087WV48 116 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 SLC9B1P1A6NJY1 282 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TOX3O15405 576 aaPredicted RBP12.29□□□□□ -0.44
LSM5-201ENST00000223084 RRP8O43159 456 aaKnown RBP12.29□□□□□ -0.44
LSM5-201ENST00000223084 PIAS1O75925 651 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 NELFEP18615 380 aaKnown RBP12.29□□□□□ -0.44
LSM5-201ENST00000223084 CDH3P22223 829 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PRDX3P30048 256 aaKnown RBP12.29□□□□□ -0.44
LSM5-201ENST00000223084 SSTR1P30872 391 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 SHMT2P34897 504 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PGGT1BP53609 377 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TIAL1Q01085 375 aaKnown RBP eCLIP12.29□□□□□ -0.44
LSM5-201ENST00000223084 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CBLBQ13191 982 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 GRB7Q14451 532 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TGIF1Q15583 401 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 KYNUQ16719 465 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 KLHL38Q2WGJ6 581 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 UNC5DQ6UXZ4 953 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 LRRC69Q6ZNQ3 347 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TRIM73Q86UV7 250 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CCDC25Q86WR0 208 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 DCUN1D3Q8IWE4 304 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 SPACA3Q8IXA5 215 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CD200R1Q8TD46 325 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 KCNE4Q8WWG9 221 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 ELMO2Q96JJ3 720 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 SLC41A2Q96JW4 573 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 CD180Q99467 661 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 ACTR10Q9NZ32 417 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 SEMA5BQ9P283 1151 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PSAT1Q9Y617 370 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 ANKRD12Q6UB98 2062 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 ADAMTS20P59510 1910 aa12.29□□□□□ -0.44
LSM5-201ENST00000223084 PIPSLA2A3N6 862 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 EIF3HO15372 352 aaKnown RBP eCLIP12.28□□□□□ -0.44
LSM5-201ENST00000223084 KLK10O43240 276 aa12.28□□□□□ -0.44
LSM5-201ENST00000223084 C1orf105O95561 183 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms