RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 EXT2Q93063 718 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 APOPT1Q96IL0 206 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC12A9Q9BXP2 914 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 TFB2MQ9H5Q4 396 aaKnown RBP26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 PDE10AQ9Y233 779 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 ARID1BQ8NFD5 2236 aaPredicted RBP26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 PPM1DO15297 605 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 SH3BP5O60239 455 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 GLRA3O75311 464 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 NDUFS1P28331 727 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 FASLGP48023 281 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 GPR18Q14330 331 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 NR0B2Q15466 257 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 TTMPQ5BVD1 217 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 C16orf46Q6P387 395 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 TTC23LQ6PF05 361 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 BANPQ8N9N5 519 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 FAM181AQ8N9Y4 354 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 PARVBQ9HBI1 364 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 TMEM216Q9P0N5 145 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 DCDC2Q9UHG0 476 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 RNF112Q9ULX5 631 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 PADI4Q9UM07 663 aa26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 RIF1Q5UIP0 2472 aaKnown RBP26.51■■□□□ 1.83
CHMP4B-201ENST00000217402 SLC16A5O15375 505 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 CCT5P48643 541 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 MAGOHP61326 146 aaKnown RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 PPP1R3AQ16821 1122 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 AGBL2Q5U5Z8 902 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 KIAA2013Q8IYS2 634 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 AVL9Q8NBF6 648 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 TLCD1Q96CP7 247 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 CAMK1GQ96NX5 476 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 NRTNQ99748 197 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 C12orf65Q9H3J6 166 aaKnown RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 KIR3DX1Q9H7L2 352 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 XPR1Q9UBH6 696 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 RNF215Q9Y6U7 377 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 LY6G6EA0A0G2JKS1 128 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 PABPN1LA6NDY0 278 aaKnown RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 GSTA1P08263 222 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 CRHR1P34998 444 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 RPIAP49247 311 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 KPNA2P52292 529 aaKnown RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 PLCL1Q15111 1095 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 PROX2Q3B8N5 592 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 TECRLQ5HYJ1 363 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 N4BP2L1Q5TBK1 243 aaPredicted RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 MBOAT1Q6ZNC8 495 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 LCA5Q86VQ0 697 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 OR52E1Q8NGJ3 308 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 STAG3L4Q8TBR4 150 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 MAGEC3Q8TD91 643 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 MCOLN3Q8TDD5 553 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 ATP6V1G3Q96LB4 118 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 IQCGQ9H095 443 aaKnown RBP26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 LRIT1Q9P2V4 623 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 POLG2Q9UHN1 485 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 U3KQA8 63 aa26.5■■□□□ 1.83
CHMP4B-201ENST00000217402 RHPN2P1A8MT19 583 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 TK2O00142 265 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 ATP8B1O43520 1251 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 GUCA1CO95843 209 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 KCNC1P48547 511 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 DAB2P98082 770 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 GPSM1Q86YR5 675 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 RAD51AP1Q96B01 352 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 TRIM54Q9BYV2 358 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 MKS1Q9NXB0 559 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 CPSF2Q9P2I0 782 aaKnown RBP26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 OARD1Q9Y530 152 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 ACTL7BQ9Y614 415 aa26.49■■□□□ 1.83
CHMP4B-201ENST00000217402 CPED1A4D0V7 1026 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 NCF1BA6NI72 391 aaPredicted RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 NCF1CA8MVU1 366 aaPredicted RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 KERAO60938 352 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ENO2P09104 434 aaPredicted RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 HIST1H2AGP0C0S8 130 aaPredicted RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 NCF1P14598 390 aaPredicted RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 HIST1H2ADP20671 130 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 GRB7Q14451 532 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 GUSBP11Q6P575 273 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 TMEM26Q6ZUK4 368 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ALKBH8Q96BT7 664 aaKnown RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 HIST1H2AHQ96KK5 128 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 CNDP2Q96KP4 475 aaKnown RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 IL17FQ96PD4 163 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ATOH8Q96SQ7 321 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 PKP4Q99569 1192 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 HIST1H2AJQ99878 128 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 H2AFJQ9BTM1 129 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 XKR8Q9H6D3 395 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ARL15Q9NXU5 204 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 NCKIPSDQ9NZQ3 722 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 FTSJ1Q9UET6 329 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ASCC3Q8N3C0 2202 aaKnown RBP26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 ZNF292O60281 2723 aa26.48■■□□□ 1.83
CHMP4B-201ENST00000217402 NUDT21O43809 227 aaKnown RBP26.47■■□□□ 1.83
CHMP4B-201ENST00000217402 RBP1P09455 135 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms