RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SLC39A3Q9BRY0 314 aa16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 TRMT61BQ9BVS5 477 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 OR2AG1Q9H205 316 aa16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 ACTR8Q9H981 624 aa16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 MRPL40Q9NQ50 206 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 TMEM45AQ9NWC5 275 aa16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 CD300AQ9UGN4 299 aa16.82■□□□□ 0.28
RABGGTA-201ENST00000216840 A0A1W2PP18 115 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ASPDHA6ND91 283 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 H3BNX3 289 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC28A1O00337 649 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 RGS14O43566 566 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 TCN1P20061 433 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 IL12AP29459 219 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 PBLDP30039 288 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 WASP42768 502 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SOX9P48436 509 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 KCNK10P57789 538 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ENPP2Q13822 863 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 RFTN2Q52LD8 501 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 FAM46CQ5VWP2 391 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC22A15Q8IZD6 547 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 PROKR1Q8TCW9 393 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ZCCHC2Q9C0B9 1178 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 GULP1Q9UBP9 304 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SUCOQ9UBS9 1254 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ZNHIT2Q9UHR6 403 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ZNF490Q9ULM2 529 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 TICRRQ7Z2Z1 1910 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 KCNE1BA0A087WTH5 132 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 FAM234BA2RU67 622 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 PRORSD1PA6NEY8 169 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 MAP3K7O43318 606 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 PDHA2P29803 388 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 DRD3P35462 400 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 TAF11Q15544 211 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 GGTA1PQ4G0N0 100 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SGO1Q5FBB7 561 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 IL23RQ5VWK5 629 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 HOMEZQ8IX15 550 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 VPS33AQ96AX1 596 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ZNF570Q96NI8 536 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 HOPXQ9BPY8 73 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 ATG10Q9H0Y0 220 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 IL1RL2Q9HB29 575 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 DNAJC11Q9NVH1 559 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 BCAP29Q9UHQ4 241 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC22A14Q9Y267 594 aa16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 POLR3HQ9Y535 204 aaPredicted RBP16.81■□□□□ 0.28
RABGGTA-201ENST00000216840 FXYD1O00168 92 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 G6PDP11413 515 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 ITPKAP23677 461 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 MAP4P27816 1152 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC7A2P52569 658 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 PFN3P60673 137 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 TRIM25Q14258 630 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 CPSF6Q16630 551 aaKnown RBP eCLIP16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 SAMD4BQ5PRF9 694 aaKnown RBP16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 TLDC1Q6P9B6 456 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 CYP20A1Q6UW02 462 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 NUDT18Q6ZVK8 323 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 DHDDSQ86SQ9 333 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 MINDY1Q8N5J2 469 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 BHLHE22Q8NFJ8 381 aaPredicted RBP16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 ASB9Q96DX5 294 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 ACTL8Q9H568 366 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 TRIM39Q9HCM9 518 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 ATXN10Q9UBB4 475 aa16.8■□□□□ 0.28
RABGGTA-201ENST00000216840 ANKRD28O15084 1053 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 MID1O15344 667 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 EEDO75530 441 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 KRT6AP02538 564 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 KRT6BP04259 564 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC2A4P14672 509 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 KRT6CP48668 564 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 GALK1P51570 392 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 HMGCS1Q01581 520 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 TLR1Q15399 786 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 MUM1Q2TAK8 710 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 SMU1Q2TAY7 513 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 CCSMST1Q4G0I0 132 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 SLC44A4Q53GD3 710 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 PRMT9Q6P2P2 845 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 RGL4Q8IZJ4 473 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 AADATQ8N5Z0 425 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 L3MBTL4Q8NA19 623 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 DNAJC9Q8WXX5 260 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 RIPOR3Q96MK2 946 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 GID8Q9NWU2 228 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 TRPM6Q9BX84 2022 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 PRAMEF4O60810 478 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 CATP04040 527 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 RPSAP08865 295 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 BDKRB1P46663 353 aa16.79■□□□□ 0.28
RABGGTA-201ENST00000216840 ATXN3P54252 364 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms