RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 NFKB2Q00653 900 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 ZNF658BQ4V348 819 aaPredicted RBP21.52■■□□□ 1.04
HOXC8-201ENST00000040584 SYTL3Q4VX76 610 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 FRMD7Q6ZUT3 714 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 DHDDSQ86SQ9 333 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 TMEM145Q8NBT3 493 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 SKA2Q8WVK7 121 aaPredicted RBP21.52■■□□□ 1.04
HOXC8-201ENST00000040584 MOCOSQ96EN8 888 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 LINC00615Q96LM1 132 aaPredicted RBP21.52■■□□□ 1.04
HOXC8-201ENST00000040584 CYP4F12Q9HCS2 524 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 ACSS2Q9NR19 701 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 TM7SF3Q9NS93 570 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 PDP2Q9P2J9 529 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 ZNHIT2Q9UHR6 403 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 ADAMTS6Q9UKP5 1117 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 POMPQ9Y244 141 aa21.52■■□□□ 1.04
HOXC8-201ENST00000040584 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.52■■□□□ 1.04
HOXC8-201ENST00000040584 LOC100653049A0A140TA62 436 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 E9PBE3 544 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 GRID2O43424 1007 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 KLHL41O60662 606 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 KRT34O76011 436 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 SLCO2B1O94956 709 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 CEACAM5P06731 702 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 ENO3P13929 434 aaPredicted RBP21.52■■□□□ 1.03
HOXC8-201ENST00000040584 ARL13AQ5H913 290 aaPredicted RBP21.52■■□□□ 1.03
HOXC8-201ENST00000040584 TSSK4Q6SA08 328 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 MAMSTRQ6ZN01 415 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 LRRTM4Q86VH4 590 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.52■■□□□ 1.03
HOXC8-201ENST00000040584 CFAP206Q8IYR0 622 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 SNX19Q92543 992 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 TMEM159Q96B96 161 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 FAR2Q96K12 515 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 MRPL40Q9NQ50 206 aaKnown RBP21.52■■□□□ 1.03
HOXC8-201ENST00000040584 SLC17A4Q9Y2C5 497 aa21.52■■□□□ 1.03
HOXC8-201ENST00000040584 NCOR1O75376 2440 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SLC5A10A0PJK1 596 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 PRAMEF26H0Y7S4 382 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 PAX7P23759 505 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 NAGLUP54802 743 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 PFN3P60673 137 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SH2D4BQ5SQS7 431 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SBSNQ6UWP8 590 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 IZUMO2Q6UXV1 221 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SLC22A9Q8IVM8 553 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 AFAP1L2Q8N4X5 818 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SLC26A7Q8TE54 656 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 PHF21BQ96EK2 531 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 UTP6Q9NYH9 597 aaKnown RBP21.51■■□□□ 1.03
HOXC8-201ENST00000040584 NCKIPSDQ9NZQ3 722 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 SLC23A2Q9UGH3 650 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 HS3ST3A1Q9Y663 406 aa21.51■■□□□ 1.03
HOXC8-201ENST00000040584 BDP1A6H8Y1 2624 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 SYCE1LA8MT33 242 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 PEX1O43933 1283 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 SMIM24O75264 130 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 HOXC4P09017 264 aaPredicted RBP21.5■■□□□ 1.03
HOXC8-201ENST00000040584 PDHA2P29803 388 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 CYLC2Q14093 348 aaPredicted RBP21.5■■□□□ 1.03
HOXC8-201ENST00000040584 TPRG1LQ5T0D9 272 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 ADAMTSL2Q86TH1 951 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 GPSM1Q86YR5 675 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 KYQ8NBH2 561 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 OR2L2Q8NH16 312 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 MAPK15Q8TD08 544 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 MOSPD1Q9UJG1 213 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 CACNA1IQ9P0X4 2223 aa21.5■■□□□ 1.03
HOXC8-201ENST00000040584 MGAT4DA6NG13 374 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 NCF1BA6NI72 391 aaPredicted RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 NCF1CA8MVU1 366 aaPredicted RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 SUPT3HB4E1H0 165 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 GPR89AB7ZAQ6 455 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 SUPT3HO75486 399 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 LINGO3P0C6S8 592 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 GPR89BP0CG08 455 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 NCF1P14598 390 aaPredicted RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 PIK3R1P27986 724 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 HK3P52790 923 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 KIAA1024LP59773 190 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 CCNIQ14094 377 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 NFE2L1Q14494 772 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 PPP1R3AQ16821 1122 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 LSM12Q3MHD2 195 aaKnown RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 XKR5Q6UX68 686 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 DLG3Q92796 817 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 OR52B2Q96RD2 323 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 FAM126AQ9BYI3 521 aaPredicted RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 KLHL4Q9C0H6 718 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 FGF22Q9HCT0 170 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 DMTF1Q9Y222 760 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 SLCO1B1Q9Y6L6 691 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 C17orf113A0A1B0GUU1 675 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 A0A1W2PPC4 97 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 TMEM221A6NGB7 291 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 M0R296 226 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 MPC1LP0DKB6 136 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 MPSTP25325 297 aa21.49■■□□□ 1.03
HOXC8-201ENST00000040584 RPL6Q02878 288 aaKnown RBP21.49■■□□□ 1.03
HOXC8-201ENST00000040584 NFATC4Q14934 902 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms