RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CARTPTQ16568 116 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 NADK2Q4G0N4 442 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 DGKKQ5KSL6 1271 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF549Q6P9A3 640 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TMEM220Q6QAJ8 160 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 GALNT10Q86SR1 603 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 HDDC3Q8N4P3 179 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 CELF5Q8N6W0 485 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 DCAF4L2Q8NA75 395 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 OR4F6Q8NGB9 312 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 RORBQ92753 470 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 KCNN1Q92952 543 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 RELTQ969Z4 430 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TIFAQ96CG3 184 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TRMT61BQ9BVS5 477 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 OSBPL11Q9BXB4 747 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 REEP1Q9H902 201 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ELOVL2Q9NXB9 296 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 RAB23Q9ULC3 237 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 LINC01565O15544 149 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ARHGEF15O94989 841 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 UROSP10746 265 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 CYP2A6P11509 494 aaPredicted RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 GSK3BP49841 420 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ROR2Q01974 943 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 SEMA3BQ13214 749 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 MAD2L1Q13257 205 aaPredicted RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 MRPL58Q14197 206 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TAZQ16635 292 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 CNPY1Q3B7I2 92 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 TECRLQ5HYJ1 363 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ZC3H12BQ5HYM0 836 aaKnown RBP11.82□□□□□ -0.52
CHPF2-201ENST00000035307 STEAP4Q687X5 459 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 STX19Q8N4C7 294 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 LRRC58Q96CX6 371 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 FBXL20Q96IG2 436 aa11.82□□□□□ -0.52
CHPF2-201ENST00000035307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■■□□□ 11.5
CHPF2-201ENST00000035307 H3BSA7 217 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 IFRD1O00458 451 aaPredicted RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ABLIM3O94929 683 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 VNN2O95498 520 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 OPN1SWP03999 348 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 MTTPP55157 894 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 AP1S1P61966 158 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SH3BP2P78314 561 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 HEATR4Q86WZ0 1026 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ANKLE1Q8NAG6 615 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 PLEKHA8Q96JA3 519 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 PLEKHG4BQ96PX9 1271 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 PNPLA3Q9NST1 481 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 DUSP12Q9UNI6 340 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SLC22A14Q9Y267 594 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ARPC2O15144 300 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 APODP05090 189 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 EIF2S1P05198 315 aaKnown RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SRCP12931 536 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ADARP55265 1226 aaKnown RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SLC44A4Q53GD3 710 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF542PQ5EBM4 170 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ZNF678Q5SXM1 525 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TANGO2Q6ICL3 276 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TXNDC11Q6PKC3 985 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 RAVER1Q8IY67 606 aaKnown RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 MDGA1Q8NFP4 955 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 PTERQ96BW5 349 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ADI1Q9BV57 179 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TDRD1Q9BXT4 1180 aaKnown RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 KLHL25Q9H0H3 589 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 AASDHPPTQ9NRN7 309 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 LOC730098B7Z3J9 87 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 KIAA0355O15063 1070 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 GRID2O43424 1007 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 DLGAP3O95886 979 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SPANXN4Q5MJ08 99 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 OGFOD2Q6N063 350 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 CYP20A1Q6UW02 462 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TRIM48Q8IWZ4 208 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ADGRG2Q8IZP9 1017 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 ARRDC2Q8TBH0 407 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 JPH3Q8WXH2 748 aaPredicted RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SLC47A1Q96FL8 570 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 HOPXQ9BPY8 73 aaPredicted RBP11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SLC6A17Q9H1V8 727 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 SGK2Q9HBY8 427 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 TBC1D30Q9Y2I9 924 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 GMPPBQ9Y5P6 360 aa11.81□□□□□ -0.52
CHPF2-201ENST00000035307 A0A1W2PP55 124 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 TRBC1P01850 177 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 LINGO3P0C6S8 592 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 HTR6P50406 440 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 NUP107P57740 925 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 TGFBIQ15582 683 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 UNC50Q53HI1 259 aa11.8□□□□□ -0.52
CHPF2-201ENST00000035307 RAB42Q8N4Z0 105 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms