RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 MSH3P20585 1137 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 RPS3AP61247 264 aaKnown RBP10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 NCS1P62166 190 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 GTF2H2Q13888 395 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 NPTX1Q15818 432 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 DGUOKQ16854 277 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF691Q5VV52 312 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 GTF2H2CQ6P1K8 395 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 RNF19BQ6ZMZ0 732 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 RFPL4BQ6ZWI9 263 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 LRRC8DQ7L1W4 858 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 DCP2Q8IU60 420 aaKnown RBP10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 FAM20CQ8IXL6 584 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 LGI2Q8N0V4 545 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 AADATQ8N5Z0 425 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 TTC9BQ8N6N2 239 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 GTF2H4Q92759 462 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 FBXO32Q969P5 355 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 SCML2Q9UQR0 700 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 EIF3LQ9Y262 564 aaKnown RBP10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 NEUROG3Q9Y4Z2 214 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 ANGPTL3Q9Y5C1 460 aa10.32□□□□□ -0.76
CX3CL1-201ENST00000006053 MYO1GB0I1T2 1018 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 ANKRD28O15084 1053 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 STX7O15400 261 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 FADS2O95864 444 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF865P0CJ78 1059 aaPredicted RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 BMP4P12644 408 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 GDF5P43026 501 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 ILF2Q12905 390 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 TUSC3Q13454 348 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PRR23BQ6ZRT6 265 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 LIX1Q8N485 282 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 ATAD1Q8NBU5 361 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PJA1Q8NG27 643 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 FATE1Q969F0 183 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 MTFMTQ96DP5 389 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 EGFL8Q99944 293 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 APOL5Q9BWW9 433 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 FARSBQ9NSD9 589 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 KLQ9UEF7 1012 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 FBXO10Q9UK96 956 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 IGLV3-10A0A075B6K4 115 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 OR7A17O14581 309 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PRMT5O14744 637 aaPredicted RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 GUCY1B2O75343 617 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 CREG1O75629 220 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 UGT2B4P06133 528 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 TGFBR1P36897 503 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PHKG1Q16816 387 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 INAVAQ3KP66 663 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PAGE2Q7Z2X7 111 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 MICU2Q8IYU8 434 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 NETO1Q8TDF5 533 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 CAPSLQ8WWF8 208 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 S100ZQ8WXG8 99 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 FAM120BQ96EK7 910 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 SUSD3Q96L08 255 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 TRIB3Q96RU7 358 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 RHNO1Q9BSD3 238 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 NSUN3Q9H649 340 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC25A37Q9NYZ2 338 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 USE1Q9NZ43 259 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 POU2F3Q9UKI9 436 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 INTS6Q9UL03 887 aaKnown RBP10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 PADI3Q9ULW8 664 aa10.31□□□□□ -0.76
CX3CL1-201ENST00000006053 MYADML2A6NDP7 307 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SEC22BO75396 215 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 LPOP22079 712 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 IGFBP5P24593 272 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SERPINB10P48595 397 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TTPAP49638 278 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TAF1AQ15573 450 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 UTS2BQ765I0 119 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC22A16Q86VW1 577 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 P2RY8Q86VZ1 359 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ANKRD46Q86W74 232 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 MSRB3Q8IXL7 192 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PSMA8Q8TAA3 256 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 RHBDF1Q96CC6 855 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 OR52E6Q96RD3 313 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 BARD1Q99728 777 aaKnown RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 MYOCQ99972 504 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 FBXO44Q9H4M3 255 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PRG3Q9Y2Y8 225 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 GRXCR2A6NFK2 248 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 DIRAS1O95057 198 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 GABARAPO95166 117 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SCELO95171 688 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SEC24AO95486 1093 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF682O95780 498 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PGRP06401 933 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 YBEYP58557 167 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TUBA1BP68363 451 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PURAQ00577 322 aaKnown RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 CXCL17Q6UXB2 119 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 GRAMD2AQ8IUY3 354 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms