RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Eif2dQ61211 570 aaKnown RBP13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Calm5Q6W3E0 140 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Spag1Q80ZX8 901 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Dppa4Q8CCG4 296 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 GnalQ8CGK7 381 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lurap1lQ8K2P1 221 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cacul1Q8R0X2 377 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 CtbsQ8R242 366 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mob2Q8VI63 235 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 SelenosQ9BCZ4 190 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tpk1Q9R0M5 243 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 KantrA0A1W2P7I0 76 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm6133B2RY53 190 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 4930558K02RikE0CXC6 182 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm45837F7D3W5 961 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm7970L7N271 213 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm7980L7N471 213 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tnfrsf11aO35305 625 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gna12P27600 379 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tspan5P62080 268 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lgals3bpQ07797 577 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 H2-Q2Q4KN81 360 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Slc6a4Q60857 630 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Six2Q62232 296 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fstl1Q62356 306 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 IrgcQ8C262 412 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Taf10Q8K0H5 218 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lrch4Q921G6 680 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ears2Q9CXJ1 523 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Zdhhc21Q9D270 265 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 NtsQ9D3P9 169 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Prorsd1Q9D820 169 aa13.76□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Adamts6D3Z1A5 1117 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Calhm3J3QMI4 347 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mmp10O55123 476 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cd70O55237 195 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Dpy19l2P0CW70 773 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Psmd3P14685 530 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cyp2a4P15392 494 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cyp2a5P20852 494 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rpl26P61255 145 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tmem45aQ60774 273 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pcp4l1Q6W8Q3 68 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mcph1Q7TT79 822 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 NeproQ8R2U2 564 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tbc1d15Q9CXF4 671 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Trpv4Q9EPK8 871 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rdh11Q9QYF1 316 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Eif2s3xQ9Z0N1 472 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Eif2s3yQ9Z0N2 472 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr1480A0A140LIR8 359 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Itm2bO89051 266 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cfl2P45591 166 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 DsppP97399 934 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Eif2ak2Q03963 515 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pyroxd2Q3U4I7 581 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Zfp120Q8BZW4 436 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 NaprtQ8CC86 538 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pxdc1Q8JZU6 231 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cers2Q924Z4 380 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Sntg1Q925E1 517 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rwdd2bQ99M03 290 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 PacrglQ9D3X5 248 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Xlr4aA2BI40 215 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ttll11A4Q9F4 727 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fam71aB7XG49 585 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr1022L7MTT3 315 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Slc6a6O35316 621 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 SpnP15702 395 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 QrfprP83861 433 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Serpinf1P97298 417 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tnfaip8l3Q3TBL6 204 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Sppl2bQ3TD49 578 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Q3U7U4 132 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 TceancQ3US16 359 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Diras2Q5PR73 199 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Taar7dQ5QD10 358 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ppp3r1Q63810 170 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 ReltQ8BX43 436 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fbxo43Q8CDI2 640 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 RhdQ8CF94 418 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Adnp2Q8CHC8 1165 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Acsl5Q8JZR0 683 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr806Q8VFI2 313 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lpin3Q99PI4 848 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mau2Q9D2X5 619 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Jam2Q9JI59 298 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Kcnq2Q9Z351 759 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Serpine1P22777 402 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tbx5P70326 518 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Dpp10Q6NXK7 797 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Snx6Q6P8X1 406 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 MogsQ80UM7 834 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Commd7Q8BG94 200 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Msantd1Q8BIL2 278 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cstf2Q8BIQ5 580 aaKnown RBP13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Lrif1Q8CDD9 755 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Uroc1Q8VC12 676 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Spef1Q99JL1 234 aa13.75□□□□□ -0.21
Col3a1-201ENSMUST00000087883 ArskQ9D2L1 553 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms