RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Q3UY34 256 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zc3h12aQ5D1E7 596 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Abcb7Q61102 752 aaKnown RBP10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vsx2Q61412 361 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sdr16c5Q7TQA3 309 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 TiprlQ8BH58 271 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ccdc142Q8CAI1 738 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ca12Q8CI85 354 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trpv3Q8K424 791 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Igsf8Q8R366 611 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Akirin1Q99LF1 191 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tmem9Q9CR23 183 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cngb3Q9JJZ9 694 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 St6galnac4Q9R2B6 360 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ep400Q8CHI8 3072 aaKnown RBP10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prrt4B2RU40 902 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr596F8VQ26 312 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Itgb1P09055 798 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cdh3P10287 822 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 GhrP16882 650 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pdcd5P56812 126 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pld2P97813 933 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Znf800Q0VEE6 662 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ap5b1Q3TAP4 876 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Q3V0E1 1183 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr325Q5NCD2 326 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pfkfb4Q6DTY7 469 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr1128Q7TR47 311 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Got1l1Q7TSV6 404 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Skida1Q80YR3 822 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Adam29Q811Q4 763 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 AW551984Q8BGF0 804 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hus1Q8BQY8 280 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Frs2Q8C180 508 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Wdr47Q8CGF6 920 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 BtdQ8CIF4 520 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ppp1r8Q8R3G1 351 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr806Q8VFI2 313 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trem2Q99NH8 227 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 2610042L04RikQ9D073 150 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ccdc81Q9D5W4 654 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mrpl17Q9D8P4 176 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zswim2Q9D9X6 631 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gfra4Q9JJT2 260 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 GghQ9Z0L8 317 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Chil5A0A0G2JDS2 431 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cilp2D3Z7H8 1162 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r118E9Q1C1 853 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 4930579F01RikE9Q3L6 325 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm8334F7CD45 553 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Arl6O88848 186 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mkln1O89050 735 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 S100a6P14069 89 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 MutP16332 748 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cdc25bP30306 576 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Psme2P97372 239 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 OxtrP97926 388 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mat2aQ3THS6 395 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fam35aQ3UEN2 891 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hepacam2Q4VAH7 463 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Adamts16Q69Z28 1222 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nomo1Q6GQT9 1214 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Clec18aQ7TSQ1 534 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zbtb24Q80X44 710 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Efemp1Q8BPB5 493 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc46a2Q8CA03 479 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ugt2b1Q8R084 529 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nkd1Q99MH6 471 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cby3Q9CVN6 235 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Serpinb1aQ9D154 379 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mau2Q9D2X5 619 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Efcab1Q9D3N2 212 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fundc2Q9D6K8 151 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gbe1Q9D6Y9 702 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dusp26Q9D700 211 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Glipr1l1Q9DAG6 236 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Yipf5Q9EQQ2 257 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tssc4Q9JHE7 317 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Clec1bQ9JL99 229 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tcea2Q9QVN7 299 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Atp6ap1Q9R1Q9 463 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zfp563B8JJZ9 448 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r94E9PZK8 818 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm11236J3QMS7 360 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 LatO54957 242 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Npr1P18293 1057 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 PenkP22005 268 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 BcheQ03311 603 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Esrp1Q3US41 680 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 SynaQ5G5D5 617 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Glp2rQ5IXF8 512 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dmc1Q61880 340 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp4b1Q64462 511 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 SvoplQ6PDF3 494 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gabbr2Q80T41 940 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 MtdhQ80WJ7 579 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Atxn7l2Q8C8K6 696 aa10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mta1Q8K4B0 715 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Sf3b4Q8QZY9 424 aaKnown RBP10.68□□□□□ -0.7
Msh3-201ENSMUST00000022220 Art3Q8R2G4 371 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms