RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pcbp1P60335 356 aaKnown RBP16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Zfp595Q8BIN6 625 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Psg23Q9D2U0 471 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pus10Q9D3U0 527 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Psg21Q9DAV5 471 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Gm13276A0A087WR18 182 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ccdc163A2AGD7 326 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Vmn1r238E9Q373 306 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Psmb10O35955 273 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Vmn2r1O70410 912 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 GcgP55095 180 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Galnt3P70419 633 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PamP97467 979 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Foxred2Q3USW5 665 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Naaladl1Q7M758 745 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr1036Q7TR85 310 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PdprQ7TSQ8 878 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Gtf2a2Q80ZM7 109 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 SynbQ8BI41 618 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Q8CCC3 530 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Irak2Q8CFA1 622 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Tnfaip8Q921Z5 198 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Traf7Q922B6 594 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Snx5Q9D8U8 404 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Krt81Q9ERE2 481 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Cldn8Q9Z260 225 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Igkv5-43A0A0B4J1J2 115 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ccdc194A0A140LIT1 234 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rhbdl2A2AGA4 302 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr1215A3KGY3 312 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Fgl2P12804 432 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Slc2a2P14246 523 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 StsP50427 624 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Asprv1Q09PK2 339 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ankrd28Q505D1 1053 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Bpifb1Q61114 474 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 TsnQ62348 228 aaKnown RBP16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr667Q7TRP4 326 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PgghgQ8BP56 690 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Mettl24Q8CCB5 363 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Sik2Q8CFH6 931 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 FevQ8QZW2 237 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Prl7c1Q9CRB5 251 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Tnni1Q9WUZ5 187 aa16.54■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ttll9A2APC3 461 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 5830411N06RikB3F5L4 1112 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Hipk1O88904 1210 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rrm2P11157 390 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 H2-Q8P14430 326 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Cyp2f2P33267 491 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Adamts19P59509 1210 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rack1P68040 317 aaKnown RBP16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 H2-Q6P79568 326 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Smu1Q3UKJ7 513 aaKnown RBP16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Klra2Q60660 288 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Klf2Q60843 354 aaKnown RBP16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Slc23a3Q60850 611 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Mapk10Q61831 464 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Lrfn2Q80TG9 788 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Lix1lQ8BQ89 337 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Svs2Q8BS30 375 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr1047Q8VGS0 319 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Glod5Q9D8I3 148 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ak1Q9R0Y5 194 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Creb3l1Q9Z125 519 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Casp8ap2Q9WUF3 1962 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rhox2fA2ANE0 191 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rhox3fA2ANE1 215 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pnldc1B2RXZ1 531 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ptchd4B9EKX1 904 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 StamP70297 548 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Serpina5P70458 405 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Krt2Q3TTY5 707 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Syndig1lQ3USQ7 237 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Dpy19l3Q71B07 716 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Enkd1Q7TSV9 346 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Arl5aQ80ZU0 179 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Grik4Q8BMF5 956 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Bend7Q8BSV3 434 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Q8CDN1 933 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr815Q8VFU0 316 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 GneQ91WG8 722 aaKnown RBP16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 2200002D01RikQ9D809 114 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pou5f2Q9DAC9 329 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr71Q9QZ18 312 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Clip3B9EHT4 547 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Zfp780bE9Q2S6 806 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 AbatP61922 500 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Zfp607aQ3TQG9 686 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Dnajc15Q78YY6 149 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Nup54Q8BTS4 510 aaKnown RBP16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pdcd2lQ8C5N5 364 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PdgfcQ8CI19 345 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Tmprss4Q8VCA5 435 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Atp5dQ9D3D9 168 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PgcQ9D7R7 392 aa16.53■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Sirpb1aA0A0A6YYP6 397 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Rdh7O88451 316 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 GalP47212 124 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ccr7P47774 378 aa16.52■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms