RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ebf4Q8K4J2 599 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Eif3lQ8QZY1 564 aaKnown RBP18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nprl3Q8VIJ8 569 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Aim2Q91VJ1 354 aaKnown RBP18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 MlycdQ99J39 492 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nmnat1Q9EPA7 285 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nif3l1Q9EQ80 376 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Aldh1a3Q9JHW9 512 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pate3B3GLJ3 98 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc16a8O35308 492 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Grem1O70326 184 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mtnd4P03911 459 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ctps1P70698 591 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Crisp1Q03401 244 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tapt1Q4VBD2 564 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Q5EBG8 199 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc23a3Q60850 611 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Colgalt2Q6NVG7 625 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vtcn1Q7TSP5 283 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 AW551984Q8BGF0 804 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pex26Q8BGI5 305 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rd3Q8BRE0 195 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Casp9Q8C3Q9 454 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rcor1Q8CFE3 480 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Bdh2Q8JZV9 245 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Emid1Q91VF5 444 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Serpinb11Q9CQV3 388 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nudt17Q9CWD3 296 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rnf181Q9CY62 165 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Akr1e2Q9DCT1 301 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olig2Q9EQW6 323 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hacl1Q9QXE0 581 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dock3Q8CIQ7 2027 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Oas1eA0A0J9YV76 386 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hk2O08528 917 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gria1P23818 907 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 TekQ02858 1122 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cxcr5Q04683 374 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 P2rx3Q3UR32 397 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfml2bQ3V1G4 746 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fam20cQ5MJS3 579 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fam71bQ5STT6 665 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Lix1Q6P566 282 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Itln1bQ80ZA0 313 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Galnt13Q8CF93 556 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Kcnc4Q8R1C0 628 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Actr8Q8R2S9 624 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Oas1hQ8VI97 369 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Smap1Q91VZ6 440 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ptgr1Q91YR9 329 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mta3Q924K8 591 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mrpl9Q99N94 265 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Atp13a2Q9CTG6 1169 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Smim23Q9DAL0 136 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn1r49Q9WUF1 310 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 A0A1L1ST33 502 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Il1aP01582 270 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 C1qbP14106 253 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ugt2b17P17717 530 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Csf2rbP26955 896 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc19a1P41438 512 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Smu1Q3UKJ7 513 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zfp868Q3UTQ6 422 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pik3r3Q64143 461 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dcaf13Q6PAC3 445 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ranbp10Q6VN19 620 aaKnown RBP18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Bcas1Q80YN3 633 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 H2-M10.2Q85ZW9 329 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tusc3Q8BTV1 347 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Abi1Q8CBW3 481 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Aldh4a1Q8CHT0 562 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mtfr2Q8VED8 361 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr866Q8VFI7 312 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ugt2b38Q91WH2 530 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 KelQ9EQF2 713 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gpr63Q9EQQ3 425 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zbp1Q9QY24 411 aa18.37■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rnf165E9QAU8 347 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm4847G3X946 537 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn2r21K7N6Y7 853 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn2r31L7N1Z4 861 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn2r20L7N2B1 853 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 NagluO88325 739 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 P01807 119 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 H2-Q8P14430 326 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Arl1P61211 181 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 H2-Q6P79568 326 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Nt5c3bQ3UFY7 300 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Krtcap2Q5RL79 136 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Sema4aQ62178 760 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn1r215Q8R264 300 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Abhd4Q8VD66 342 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Olfr1250Q8VGM3 314 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pqbp1Q91VJ5 263 aaKnown RBP18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pramel1Q99MW3 458 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 MrrfQ9D6S7 262 aaKnown RBP18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dusp26Q9D700 211 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Alg13Q9D8C3 1166 aaKnown RBP18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Sgk2Q9QZS5 367 aa18.36■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Epb41l1Q9Z2H5 879 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms