RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 GGT5P36269 586 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 SLC6A12P48065 614 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 TCHHL1Q5QJ38 904 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-232ENST00000641947 ANO7Q6IWH7 933 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 LRRTM4Q86VH4 590 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 TRIM69Q86WT6 500 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 OR2T34Q8NGX1 318 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 TWIST2Q8WVJ9 160 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 BTBD1Q9H0C5 482 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 PHPT1Q9NRX4 125 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-232ENST00000641947 MUC3AQ02505 3323 aa17.17■□□□□ 0.34
PHGDH-232ENST00000641947 TRPC5OSA6NMA1 111 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 H0Y8X5 98 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 CCDC22O60826 627 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 MLYCDO95822 493 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 CEACAM5P06731 702 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 DGKEP52429 567 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 CORO7P57737 925 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 STARD6P59095 220 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 NAA20P61599 178 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 HABP4Q5JVS0 413 aaKnown RBP17.16■□□□□ 0.34
PHGDH-232ENST00000641947 CDKL4Q5MAI5 379 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 TPRG1LQ5T0D9 272 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 GPRIN3Q6ZVF9 776 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 FRMD1Q8N878 549 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-232ENST00000641947 ASB12Q8WXK4 309 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 MARK4Q96L34 752 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 HHIPQ96QV1 700 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 APOOQ9BUR5 198 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 OR52A5Q9H2C5 316 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 ZNF385DQ9H6B1 395 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 POLMQ9NP87 494 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-232ENST00000641947 MRPL40Q9NQ50 206 aaKnown RBP17.16■□□□□ 0.34
PHGDH-232ENST00000641947 OPTCQ9UBM4 332 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 WNT16Q9UBV4 365 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 BTRCQ9Y297 605 aa17.16■□□□□ 0.34
PHGDH-232ENST00000641947 FANCMQ8IYD8 2048 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 K7EPI3 171 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 IGLV3-19P01714 112 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ACADLP28330 430 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ACTN3Q08043 901 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 KRT72Q14CN4 511 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 SIX5Q8N196 739 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PGBD3Q8N328 593 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 OR4F6Q8NGB9 312 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 MAFAQ8NHW3 353 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PYCR2Q96C36 320 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 C19orf60Q96EN9 201 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 CCDC28BQ9BUN5 200 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 C1QTNF7Q9BXJ2 289 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 C6orf106Q9H6K1 298 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 IPPKQ9H8X2 491 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 GIMAP2Q9UG22 337 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 CYP8B1Q9UNU6 501 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 SLC17A4Q9Y2C5 497 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PLEKHM1Q9Y4G2 1056 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 CEP192Q8TEP8 1941 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ATP6AP2A0A1C7CYW4 349 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 KANSL1LA0AUZ9 987 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 FAM170BA6NMN3 283 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 STK16O75716 305 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ATP6AP2O75787 350 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 SEMA4FO95754 770 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 HIST1H2AGP0C0S8 130 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 NCF2P19878 526 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 HIST1H2ADP20671 130 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 AP1S2P56377 157 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 LRRC32Q14392 662 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PTCHD3Q3KNS1 767 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 NXNQ6DKJ4 435 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ACAD11Q709F0 780 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 AMZ2Q86W34 360 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 AFAP1L2Q8N4X5 818 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 CDYL2Q8N8U2 506 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 MCOLN3Q8TDD5 553 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 SLC7A6OSQ96CW6 309 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 HIST1H2AHQ96KK5 128 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 CATSPER2Q96P56 530 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PKP4Q99569 1192 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 HIST1H2AJQ99878 128 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 H2AFJQ9BTM1 129 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 TRIM54Q9BYV2 358 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ZDHHC5Q9C0B5 715 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ATG10Q9H0Y0 220 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ACTR5Q9H9F9 607 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 ZNHIT2Q9UHR6 403 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 FBXL21Q9UKT6 434 aa17.15■□□□□ 0.34
PHGDH-232ENST00000641947 G3BP2Q9UN86 482 aaKnown RBP17.15■□□□□ 0.34
PHGDH-232ENST00000641947 PCM1Q15154 2024 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 C19orf67A6NJJ6 358 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 LATO43561 262 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 DCXO43602 365 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 KATNA1O75449 491 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 C1orf105O95561 183 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 IGHV4-34P06331 123 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 HTR6P50406 440 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 PKNOX1P55347 436 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms