RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ZNF639Q9UID6 485 aa13.51□□□□□ -0.25
SCARB2-227ENST00000640957 A0A0G2JLL6 359 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 PNMA8CA0A1B0GUJ8 204 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 LOC110117498-PIK3R3F6TDL0 507 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 ECI2O75521 394 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 DDX5P17844 614 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 KRT20P35900 424 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 GDF5P43026 501 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 IDH2P48735 452 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 FCGRTP55899 365 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 RPL38P63173 70 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CREMQ03060 361 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 EMX2Q04743 252 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 MXD1Q05195 221 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 SLC10A7Q0GE19 358 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF691Q5VV52 312 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 SMYD5Q6GMV2 418 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 PRRT2Q7Z6L0 340 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 TAC4Q86UU9 113 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 GLCCI1Q86VQ1 547 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 SCN4BQ8IWT1 228 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 OR6F1Q8NGZ6 308 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CDC26Q8NHZ8 85 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CEP19Q96LK0 163 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 FARSBQ9NSD9 589 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 AIG1Q9NVV5 245 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 DNAJB9Q9UBS3 223 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 SDHBP21912 280 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 SSTR4P31391 388 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 GJA5P36382 358 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 UAP1L1Q3KQV9 507 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 EFL1Q7Z2Z2 1120 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 LSRQ86X29 649 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CIR1Q86X95 450 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 PGBD5Q8N414 524 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 OMA1Q96E52 524 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 YIPF6Q96EC8 236 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 KCNC2Q96PR1 638 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 TRNT1Q96Q11 434 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 RBM4BQ9BQ04 359 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 RBM4Q9BWF3 364 aaKnown RBP13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CPNE5Q9HCH3 593 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 CD274Q9NZQ7 290 aa13.5□□□□□ -0.25
SCARB2-227ENST00000640957 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SH3BGRLO75368 114 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 POMCP01189 267 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 APOA1P02647 267 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 CAPN1P07384 714 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 CCDC159P0C7I6 412 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 UMPSP11172 480 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 HOXD8P13378 290 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 RAB25P57735 213 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SPANXN4Q5MJ08 99 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 KANK2Q63ZY3 851 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PTRH1Q86Y79 214 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 TMEM40Q8WWA1 233 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 EXOC2Q96KP1 924 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 BTN2A3PQ96KV6 586 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 AGAP4Q96P64 663 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 DUSP16Q9BY84 665 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PDP1Q9P0J1 537 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 KIF17Q9P2E2 1029 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 KLHL20Q9Y2M5 609 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 WBP11Q9Y2W2 641 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 H3BM21 787 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 CXCR6O00574 342 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 DSCR3O14972 297 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 AKR7A2O43488 359 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 TLL1O43897 1013 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 FKBP9O95302 570 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 POU2F1P14859 743 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PRKACBP22694 351 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 HTR1EP28566 365 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF135P52742 658 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 CYP27C1Q4G0S4 372 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 ANKS6Q68DC2 871 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SLC44A2Q8IWA5 706 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 OR52J3Q8NH60 311 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PCDHGB6Q9Y5F9 930 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 COL11A1P12107 1806 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 ANXA9O76027 345 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PTPN2P17706 415 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SERPINH1P50454 418 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 EEFSECP57772 596 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 LCP2Q13094 533 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PON2Q15165 354 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 AP5B1Q2VPB7 878 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 SYCE2Q6PIF2 218 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 Q6ZSR9 355 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 NECAB2Q7Z6G3 386 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms