RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PFDN6O15212 129 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 AHSGP02765 367 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 KRT33BQ14525 404 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 ST3GAL2Q16842 350 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 C8orf74Q6P047 294 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 OTOAQ7RTW8 1153 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 ZBED8Q8IZ13 594 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 LSMEM2Q8N112 164 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 PMEPA1Q969W9 287 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 XKR8Q9H6D3 395 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 HRASLS2Q9NWW9 162 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 SEMA5BQ9P283 1151 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 ICKQ9UPZ9 632 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 VPS9D1Q9Y2B5 631 aa25.95■■□□□ 1.74
VEGFA-231ENST00000640499 ITGA2BP08514 1039 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 ANKRD34CP0C6C1 535 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 CHRM3P20309 590 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 GRB7Q14451 532 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 ACSBG2Q5FVE4 666 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 PLEKHS1Q5SXH7 462 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 FAM92BQ6ZTR7 304 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 CLEC14AQ86T13 490 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 TBC1D21Q8IYX1 336 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 OR5K2Q8NHB8 316 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 PPM1MQ96MI6 270 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 ZNF578Q96N58 590 aaPredicted RBP25.94■■□□□ 1.74
VEGFA-231ENST00000640499 TWSG1Q9GZX9 223 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 ZMYND15Q9H091 742 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 SAYSD1Q9NPB0 183 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 ZDHHC18Q9NUE0 388 aa25.94■■□□□ 1.74
VEGFA-231ENST00000640499 DMGDHQ9UI17 866 aaKnown RBP25.94■■□□□ 1.74
VEGFA-231ENST00000640499 SRRM3A6NNA2 597 aaPredicted RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 RBMS1P29558 406 aaKnown RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 ABCG1P45844 678 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 ERVPABLB-1P60509 514 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 IRGCQ6NXR0 463 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 AGBL5Q8NDL9 886 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 LCN9Q8WX39 176 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 FGF11Q92914 225 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 AARSD1Q9BTE6 412 aaKnown RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 MENTQ9BUN1 341 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 TRIT1Q9H3H1 467 aaKnown RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 RUVBL2Q9Y230 463 aaKnown RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 NFS1Q9Y697 457 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 ZFHX4Q86UP3 3567 aa25.93■■□□□ 1.74
VEGFA-231ENST00000640499 URB1O60287 2271 aaKnown RBP25.93■■□□□ 1.74
VEGFA-231ENST00000640499 C9orf172C9J069 976 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 BTN3A1O00481 513 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 KPNA5O15131 536 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 EIF3HO15372 352 aaKnown RBP eCLIP25.92■■□□□ 1.746e-7■■□□□ 13.1
VEGFA-231ENST00000640499 JMJD7P0C870 316 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 POLR2CP19387 275 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 MLLT3P42568 568 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 KPNA2P52292 529 aaKnown RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 TMED2Q15363 201 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 PRSS42Q7Z5A4 293 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ADGRF3Q8IZF5 1079 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ZBTB2Q8N680 514 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 SIDT2Q8NBJ9 832 aaKnown RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 SNIP1Q8TAD8 396 aaKnown RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 KLHL6Q8WZ60 621 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 USP7Q93009 1102 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ZDHHC12Q96GR4 267 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 NDNQ99608 321 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 SRMSQ9H3Y6 488 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ZNF768Q9H5H4 540 aaKnown RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 SMYD2Q9NRG4 433 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 SIDT1Q9NXL6 827 aaKnown RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 PLAGL1Q9UM63 463 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 PSAT1Q9Y617 370 aa25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ANKRD11Q6UB99 2663 aaPredicted RBP25.92■■□□□ 1.74
VEGFA-231ENST00000640499 ADAMTS20P59510 1910 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 IGHV5-51A0A0C4DH38 117 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CTAGE15A4D2H0 777 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CTAGE8P0CG41 777 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 SSTR1P30872 391 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 SLC5A2P31639 672 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CSTF2P33240 577 aaKnown RBP eCLIP25.91■■□□□ 1.74
VEGFA-231ENST00000640499 MAPK10P53779 464 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 GUCY2DQ02846 1103 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CAV1Q03135 178 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 RBM20Q5T481 1227 aaKnown RBP25.91■■□□□ 1.74
VEGFA-231ENST00000640499 KIAA0408Q6ZU52 694 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 GALNT7Q86SF2 657 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CTAGE6Q86UF2 777 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 AMIGO1Q86WK6 493 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 OOSP2Q86WS3 158 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CTAGE4Q8IX94 777 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 MNS1Q8NEH6 495 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 CFAP61Q8NHU2 1237 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 GSDMBQ8TAX9 411 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 KCNJ9Q92806 393 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 MAP3K3Q99759 626 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 PPANQ9NQ55 473 aaKnown RBP25.91■■□□□ 1.74
VEGFA-231ENST00000640499 FOXJ2Q9P0K8 574 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 PCDHGA7Q9Y5G6 932 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 LAMA5O15230 3695 aa25.91■■□□□ 1.74
VEGFA-231ENST00000640499 EFCAB7A8K855 629 aa25.9■■□□□ 1.74
VEGFA-231ENST00000640499 TOX3O15405 576 aaPredicted RBP25.9■■□□□ 1.74
VEGFA-231ENST00000640499 PIAS1O75925 651 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms