RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 KRTCAP3Q53RY4 240 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 ZNF805Q5CZA5 627 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 OTUD3Q5T2D3 398 aaPredicted RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 PAPD4Q6PIY7 484 aaKnown RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 C19orf48Q6RUI8 117 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 CLEC4GQ6UXB4 293 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 ZNF704Q6ZNC4 412 aaPredicted RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 MARK2Q7KZI7 788 aaKnown RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 PCGF5Q86SE9 256 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 TEX19Q8NA77 164 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 OR8K5Q8NH50 307 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 OR52I2Q8NH67 350 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 UTP15Q8TED0 518 aaKnown RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 PIGBQ92521 554 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 LINGO1Q96FE5 620 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 HES6Q96HZ4 224 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 SEPT5Q99719 369 aaPredicted RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 SEMA3CQ99985 751 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 SIL1Q9H173 461 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 LRMDAQ9H2I8 198 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 C11orf49Q9H6J7 331 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 ZNF334Q9HCZ1 680 aaPredicted RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 SMC4Q9NTJ3 1288 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 OLA1Q9NTK5 396 aaKnown RBP3.04□□□□□ -1.92
ATM-230ENST00000640388 TERF2IPQ9NYB0 399 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 PNMA2Q9UL42 364 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 RALGAPA2Q2PPJ7 1873 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 ZFHX3Q15911 3703 aa3.04□□□□□ -1.92
ATM-230ENST00000640388 MGAMO43451 1857 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 NPC1L1Q9UHC9 1359 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 ASTN2O75129 1339 aaPredicted RBP3.03□□□□□ -1.92
ATM-230ENST00000640388 LRRC37AA6NMS7 1700 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 ZCWPW2A0A1B0GU75 182 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 LIPT2A6NK58 231 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 EIF3DO15371 548 aaKnown RBP eCLIP3.03□□□□□ -1.92
ATM-230ENST00000640388 HCRTR2O43614 444 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 RARGP13631 454 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 MAN1A1P33908 653 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 UBXN2AP68543 259 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 TFAP4Q01664 338 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 LRRC26Q2I0M4 334 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 ZSCAN23Q3MJ62 389 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 SIRPB2Q5JXA9 342 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 NSUN5P2Q63ZY6 315 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 FAAH2Q6GMR7 532 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 LCN10Q6JVE6 187 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 NCEH1Q6PIU2 408 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 GLDNQ6ZMI3 551 aaPredicted RBP3.03□□□□□ -1.92
ATM-230ENST00000640388 PXKQ7Z7A4 578 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 TMEM255BQ8WV15 326 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 ALG14Q96F25 216 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 MPP4Q96JB8 637 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 EGLN2Q96KS0 407 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 C1orf74Q96LT6 269 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 PGLYRP2Q96PD5 576 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 MAGIXQ9H6Y5 334 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 TCP11L1Q9NUJ3 509 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 MARCH4Q9P2E8 410 aaPredicted RBP3.03□□□□□ -1.92
ATM-230ENST00000640388 UBA2Q9UBT2 640 aaPredicted RBP3.03□□□□□ -1.92
ATM-230ENST00000640388 FBXW11Q9UKB1 542 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 CORO1CQ9ULV4 474 aaPredicted RBP3.03□□□□□ -1.92
ATM-230ENST00000640388 MTMR6Q9Y217 621 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 LAMA5O15230 3695 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 SPG11Q96JI7 2443 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 DMXL2Q8TDJ6 3036 aa3.03□□□□□ -1.92
ATM-230ENST00000640388 CEP295Q9C0D2 2601 aa3.03□□□□□ -1.93
ATM-230ENST00000640388 DDX60Q8IY21 1712 aaKnown RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 ANKRD30AQ9BXX3 1397 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 GAKO14976 1311 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 KANSL1LA0AUZ9 987 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 CTAGE9A4FU28 777 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 OR5K3A6NET4 321 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 ENO4A6NNW6 628 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 DDX58O95786 925 aaKnown RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 CTAGE8P0CG41 777 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 IL9P15248 144 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 TNFAIP3P21580 790 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 CHMP24386 653 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 ARL3P36405 182 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 PPARGP37231 505 aaPredicted RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 ARCN1P48444 511 aaKnown RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 HOXA1P49639 335 aaPredicted RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 MMP14P50281 582 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 PRMT2P55345 433 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 RUNX1T1Q06455 604 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 CXCL9Q07325 125 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 LRMPQ12912 555 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 GKAP1Q5VSY0 366 aaPredicted RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 PLEKHM3Q6ZWE6 761 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 ATG9AQ7Z3C6 839 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 CCDC190Q86UF4 302 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 CTAGE4Q8IX94 777 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 RNF168Q8IYW5 571 aaPredicted RBP3.02□□□□□ -1.93
ATM-230ENST00000640388 RASGEF1CQ8N431 466 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 EMC1Q8N766 993 aa3.02□□□□□ -1.93
ATM-230ENST00000640388 POMGNT1Q8WZA1 660 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms