RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZNF578Q96N58 590 aaPredicted RBP21.18■□□□□ 0.98
SCN1B-206ENST00000638536 TSSK1BQ9BXA7 367 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 RAB33BQ9H082 229 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 MVB12BQ9H7P6 319 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 EPHA6Q9UF33 1036 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 CIDEBQ9UHD4 219 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 TSR3Q9UJK0 312 aaKnown RBP21.18■□□□□ 0.98
SCN1B-206ENST00000638536 UTP11Q9Y3A2 253 aaKnown RBP21.18■□□□□ 0.98
SCN1B-206ENST00000638536 NFS1Q9Y697 457 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 MGAQ8IWI9 3026 aa21.18■□□□□ 0.98
SCN1B-206ENST00000638536 C9orf172C9J069 976 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 F8W8V4 182 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 BTN3A3O00478 584 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 POLR2CP19387 275 aaPredicted RBP21.17■□□□□ 0.98
SCN1B-206ENST00000638536 CHRM3P20309 590 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 NDUFS1P28331 727 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 SLC5A2P31639 672 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 CSTF2P33240 577 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCN1B-206ENST00000638536 CARSP49589 748 aaKnown RBP21.17■□□□□ 0.98
SCN1B-206ENST00000638536 PLTPP55058 493 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 CALCOCO2Q13137 446 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 FBXO38Q6PIJ6 1188 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 OTOAQ7RTW8 1153 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 FAM129CQ86XR2 697 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 BMPERQ8N8U9 685 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 C2CD4AQ8NCU7 369 aaPredicted RBP21.17■□□□□ 0.98
SCN1B-206ENST00000638536 BBOF1Q8ND07 529 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 AGBL5Q8NDL9 886 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 GIMAP7Q8NHV1 300 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 LCN9Q8WX39 176 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 ART4Q93070 314 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 LRRC39Q96DD0 335 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 NAF1Q96HR8 494 aaKnown RBP21.17■□□□□ 0.98
SCN1B-206ENST00000638536 FOXJ2Q9P0K8 574 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 ICKQ9UPZ9 632 aa21.17■□□□□ 0.98
SCN1B-206ENST00000638536 KRT87PA6NCN2 255 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 EFCAB7A8K855 629 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 PRAMEF10O60809 474 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 ERVPABLB-1P60509 514 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 PLOD1Q02809 727 aaPredicted RBP21.16■□□□□ 0.98
SCN1B-206ENST00000638536 CBLBQ13191 982 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 GBX1Q14549 363 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 TEDDM1Q5T9Z0 273 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 CLEC14AQ86T13 490 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 LMNTD2Q8IXW0 634 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 ZBED8Q8IZ13 594 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 OR5K2Q8NHB8 316 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 SNIP1Q8TAD8 396 aaKnown RBP21.16■□□□□ 0.98
SCN1B-206ENST00000638536 FBXO25Q8TCJ0 367 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 CALML6Q8TD86 181 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 DCBLD2Q96PD2 775 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 MAP3K3Q99759 626 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 FAM167BQ9BTA0 163 aa21.16■□□□□ 0.98
SCN1B-206ENST00000638536 TFB2MQ9H5Q4 396 aaKnown RBP21.16■□□□□ 0.98
SCN1B-206ENST00000638536 TDRKHQ9Y2W6 561 aaKnown RBP21.16■□□□□ 0.98
SCN1B-206ENST00000638536 IGHV5-51A0A0C4DH38 117 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 BTN3A1O00481 513 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 PFDN6O15212 129 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 PIAS1O75925 651 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 AHSGP02765 367 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 TUBB4AP04350 444 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 EIF2S3P41091 472 aaKnown RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CLCN7P51798 805 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 SH3BP2P78314 561 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 TIAL1Q01085 375 aaKnown RBP eCLIP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 ACSBG2Q5FVE4 666 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CACHD1Q5VU97 1274 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 C8orf74Q6P047 294 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CNTN4Q8IWV2 1026 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 TBC1D21Q8IYX1 336 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 SIDT2Q8NBJ9 832 aaKnown RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 KIF18AQ8NI77 898 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 TRIT1Q9H3H1 467 aaKnown RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 SRMSQ9H3Y6 488 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 APMAPQ9HDC9 416 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 PPANQ9NQ55 473 aaKnown RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 LATS2Q9NRM7 1088 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 THSD1Q9NS62 852 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 KIF2AO00139 706 aaPredicted RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 RASSF9O75901 435 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 ANKRD34CP0C6C1 535 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 KPNA2P52292 529 aaKnown RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 GRB7Q14451 532 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CCSMST1Q4G0I0 132 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 PLEKHS1Q5SXH7 462 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CAPN12Q6ZSI9 719 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 OOSP2Q86WS3 158 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 ADGRF3Q8IZF5 1079 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 RNF31Q96EP0 1072 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 ZDHHC12Q96GR4 267 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 NDNQ99608 321 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 CTRCQ99895 268 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 RAB17Q9H0T7 212 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 SAYSD1Q9NPB0 183 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 AKAP7Q9P0M2 348 aaPredicted RBP21.15■□□□□ 0.98
SCN1B-206ENST00000638536 B3GALT1Q9Y5Z6 326 aa21.15■□□□□ 0.98
SCN1B-206ENST00000638536 PCM1Q15154 2024 aa21.14■□□□□ 0.98
SCN1B-206ENST00000638536 H3BMM5 538 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 ITPKBP27987 946 aa21.14■□□□□ 0.97
SCN1B-206ENST00000638536 PGGT1BP53609 377 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms