RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF140P52738 457 aaPredicted RBP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 CSNK2BP67870 215 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 TRAF3Q13114 568 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 MFSD10Q14728 455 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 RFTN2Q52LD8 501 aaPredicted RBP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 CATSPEREQ5SY80 951 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 SLX4IPQ5VYV7 408 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 CPZQ66K79 652 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 MMAAQ8IVH4 418 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 FCGR1BQ92637 280 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 ESAMQ96AP7 390 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 LINGO1Q96FE5 620 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 CDK15Q96Q40 435 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 TBCDQ9BTW9 1192 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 DPY30Q9C005 99 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 GMPPBQ9Y5P6 360 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 RGS14O43566 566 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 DYRK3O43781 588 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 SERPINA1P01009 418 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 SLC2A4P14672 509 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 CD36P16671 472 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 PPP1R8Q12972 351 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 SF3B4Q15427 424 aaKnown RBP eCLIP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 FAM174BQ3ZCQ3 159 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 VARS2Q5ST30 1063 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 DPP9Q86TI2 863 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 POC5Q8NA72 575 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 RIBC2Q9H4K1 309 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 U3KQV3 271 aa14.53□□□□□ -0.08
CACNA1A-220ENST00000635988 TNFRSF10BO14763 440 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 RGS13O14921 159 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 FAM20BO75063 409 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 FADS2O95864 444 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 PRSS56P0CW18 603 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 MAGEA2P43356 314 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 TTPAP49638 278 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 CLK1P49759 484 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 TBX4P57082 545 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 YBEYP58557 167 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 TSPY1Q01534 308 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 ZNF45Q02386 682 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 EN1Q05925 392 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 SLC13A2Q13183 592 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 SERINC3Q13530 473 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 UPP1Q16831 310 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 ALFQ53S48 1182 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 CACHD1Q5VU97 1274 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 TSPYL5Q86VY4 417 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 THEM5Q8N1Q8 247 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 DCBLD1Q8N8Z6 715 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 EEF1AKMT1Q8WVE0 214 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 HTRA1Q92743 480 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 DCSTAMPQ9H295 470 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 IKZF5Q9H5V7 419 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 SIAEQ9HAT2 523 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 C1orf109Q9NX04 203 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 NUDT5Q9UKK9 219 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 PKP3Q9Y446 797 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 ASB1Q9Y576 335 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 COMMD10Q9Y6G5 202 aa14.52□□□□□ -0.08
CACNA1A-220ENST00000635988 ILVBLA1L0T0 632 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 AGAP5A6NIR3 686 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 TREHO43280 583 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 ERN1O75460 977 aaKnown RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 FKBP9O95302 570 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 DLGAP3O95886 979 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 PGRP06401 933 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 PIRTP0C851 137 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 RPL38P63173 70 aaKnown RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 SIM2Q14190 667 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 LRIT3Q3SXY7 679 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 NANOGNBQ7Z5D8 188 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 GOLGA7Q7Z5G4 137 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 CALHM3Q86XJ0 350 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 SPATA2LQ8IUW3 424 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 CHPFQ8IZ52 775 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 OR4F6Q8NGB9 312 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 KCNJ9Q92806 393 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 SLC38A4Q969I6 547 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 FAM120BQ96EK7 910 aaKnown RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 ZNF486Q96H40 463 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 CEP295NLQ96MC4 621 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 NACA2Q9H009 215 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 NMUR1Q9HB89 426 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 FAM105AQ9NUU6 356 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 SLC25A37Q9NYZ2 338 aa14.52□□□□□ -0.09
CACNA1A-220ENST00000635988 BRCA1P38398 1863 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PLXNB2O15031 1838 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 A0A1W2PQH9 124 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 OR2A25A4D2G3 310 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 CASTOR2A6NHX0 329 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 C2orf81A6NN90 581 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MEIS3P2A8K0S8 358 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 SLC28A1O00337 649 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 MITFO75030 526 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 S100BP04271 92 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 EFNA1P20827 205 aaPredicted RBP14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PAX3P23760 479 aa14.51□□□□□ -0.09
CACNA1A-220ENST00000635988 PSMA3P25788 255 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms