RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 HTR3EA5X5Y0 456 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3BA6NDS4 549 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3FA6NER0 549 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 AGAP5A6NIR3 686 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CGB1A6NKQ9 187 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 OR6C75A6NL08 312 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 OR5K4A6NMS3 321 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 IQCF5A8MTL0 148 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CDRT15L2A8MXV6 281 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 A8MZ25 164 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3LB9A6J9 549 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SPECC1L-ADORA2AF8WAN1 911 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CLIC1O00299 241 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NDUFAB1O14561 156 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ADAMDEC1O15204 470 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TEX28O15482 410 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 RRP8O43159 456 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SEPT4O43236 478 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TLX2O43763 284 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ECI2O75521 394 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CIB2O75838 187 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SEC14L2O76054 403 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CSTAP01040 98 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 IGHEP01854 428 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PRKCGP05129 697 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CRYGCP07315 174 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ABHD2P08910 425 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3HP0C7X1 549 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ZCCHC18P0CG32 403 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CLUP10909 449 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ACP5P13686 325 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 POU2F1P14859 743 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CPA1P15085 419 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 EPORP19235 508 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CALB2P22676 271 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TCEA1P23193 301 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ACP1P24666 158 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SFNP31947 248 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ARL1P40616 181 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PNPLA4P41247 253 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PRKCIP41743 596 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 STAT6P42226 847 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 KCNJ4P48050 445 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PCP4P48539 62 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 AGTR2P50052 363 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CCR3P51677 355 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ARSEP51690 589 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 STAT2P52630 851 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 COPB1P53618 953 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ATP5IP56385 69 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 WDR5P61964 334 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TSPAN5P62079 268 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 KDSRQ06136 332 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 GFPT1Q06210 699 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 DMWDQ09019 674 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 GPS2Q13227 327 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF177Q13360 481 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PDCLQ13371 301 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MAB21L1Q13394 359 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 STIM1Q13586 685 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 LPIN1Q14693 890 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MFSD13AQ14CX5 517 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 HERC3Q15034 1050 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 KARSQ15046 597 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 WDR43Q15061 677 aaKnown RBP eCLIP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 PCGF3Q3KNV8 242 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 FAM153CQ494X1 144 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NADK2Q4G0N4 442 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 GPAT3Q53EU6 434 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 FASTKD1Q53R41 847 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 CEP78Q5JTW2 689 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 C10orf120Q5SQS8 335 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TSTD2Q5T7W7 516 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D9BQ66K14 1250 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF772Q68DY9 489 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3GQ6DHY5 549 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3CQ6IPX1 549 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 HMBOX1Q6NT76 420 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SARM1Q6SZW1 724 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SASS6Q6UVJ0 657 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MOXD1Q6UVY6 613 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 KIAA1324Q6UXG2 1013 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NHLRC1Q6VVB1 395 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SLC39A5Q6ZMH5 540 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NCCRP1Q6ZVX7 275 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TRAPPC11Q7Z392 1133 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ADCK2Q7Z695 626 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NUDT13Q86X67 352 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ZNF573Q86YE8 665 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ADGRF3Q8IZF5 1079 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 TBC1D3Q8IZP1 549 aaPredicted RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SYCE1Q8N0S2 351 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 MINDY1Q8N5J2 469 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 ENDOVQ8N8Q3 282 aaKnown RBP2.91□□□□□ -1.94
PSPC1-208ENST00000635562 IQUBQ8NA54 791 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 NHLRC2Q8NBF2 726 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 SLC24A4Q8NFF2 622 aa2.91□□□□□ -1.94
PSPC1-208ENST00000635562 OR7G3Q8NG95 312 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms