RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MX1P20591 662 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CIITAP33076 1130 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NRIP1P48552 1158 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 LMAN1P49257 510 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CAMPP49913 170 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 GALCP54803 685 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MFAP4P55083 255 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ZBED6P86452 979 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MGAT3Q09327 533 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 IKQ13123 557 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NAB2Q15742 525 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HSPB2Q16082 182 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 KYNUQ16719 465 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 C15orf59Q2T9L4 293 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 COL28A1Q2UY09 1125 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 USP41Q3LFD5 358 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 KRTAP24-1Q3LI83 254 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ENTPD8Q5MY95 495 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 C1QTNF12Q5T7M4 302 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HIST2H2BCQ6DN03 193 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CFAP77Q6ZQR2 320 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 STOX1Q6ZVD7 989 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 KDELC2Q7Z4H8 507 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 RPAINQ86UA6 219 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 DNAAF5Q86Y56 855 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 LINC00346Q8IVM7 164 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 RNF168Q8IYW5 571 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 SYT2Q8N9I0 419 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 POMGNT2Q8NAT1 580 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 GJC3Q8NFK1 279 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CMASQ8NFW8 434 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 OR6J1Q8NGC5 347 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 GABPB2Q8TAK5 448 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ARNTL2Q8WYA1 636 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 FBXL8Q96CD0 374 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF689Q96CS4 500 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM122AQ96E09 287 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ZC3HAV1LQ96H79 300 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ZFYVE19Q96K21 471 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 IWS1Q96ST2 819 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 RAD9AQ99638 391 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM110AQ9BQ89 295 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MXRA8Q9BRK3 442 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 SRSF8Q9BRL6 282 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 WDR83Q9BRX9 315 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 C16orf70Q9BSU1 422 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 APOL6Q9BWW8 343 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 C1QTNF5Q9BXJ0 243 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MRPL1Q9BYD6 325 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TKTL2Q9H0I9 626 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NAPBQ9H115 298 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CDT1Q9H211 546 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NDST4Q9H3R1 872 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 OSGEPL1Q9H4B0 414 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MRPL44Q9H9J2 332 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MAGEE1Q9HCI5 957 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 BPIFA1Q9NP55 256 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 PNRC2Q9NPJ4 139 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CCDC177Q9NQR7 707 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 PXMP2Q9NR77 195 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ANKRD10Q9NXR5 420 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 WSB2Q9NYS7 404 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NDRG3Q9UGV2 375 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 UTS2RQ9UKP6 389 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 AGO2Q9UKV8 859 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 PADI1Q9ULC6 663 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 STX8Q9UNK0 236 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MAGED1Q9Y5V3 778 aaPredicted RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CEPT1Q9Y6K0 416 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 A3GALT2U3KPV4 340 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 C2orf16Q68DN1 1984 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 COL4A2P08572 1712 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ACACBO00763 2458 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ABCB11O95342 1321 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CCDC171Q6TFL3 1326 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ARID2Q68CP9 1835 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PATJQ8NI35 1801 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 LOC100509620A0A075B734 347 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TRBV5-3A0A0A0MS03 114 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM170AA1A519 330 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MBLAC1A4D2B0 266 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TSPY2A6NKD2 308 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 A8MV72 311 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 A8MXE2 369 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 F8W810 466 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PAPSS1O43252 624 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 CYTH3O43739 400 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 MITFO75030 526 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TPPPO94811 219 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 GH1P01241 217 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 TUBBP07437 444 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ACTN1P12814 892 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ETFAP13804 333 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 ENO3P13929 434 aaPredicted RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 IL9P15248 144 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 IL7RP16871 459 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 UBA1P22314 1058 aaKnown RBP2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 PON1P27169 355 aa2.48□□□□□ -2.01
SMARCB1-208ENST00000634926 EEF1DP29692 281 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms